From 3653b841c1fe7712f6b53e3a27b060c2f8070a8c Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Daniel=20G=C3=B6bel?= <dgoebel@techfak.uni-bielefeld.de>
Date: Tue, 13 Feb 2024 11:36:48 +0100
Subject: [PATCH] Resolve "Add help for creating clomw_info.json"
---
.gitlab-ci.yml | 1 +
package-lock.json | 813 +++++++++---------
package.json | 2 +
src/App.vue | 2 +-
src/components/CopyToClipboardIcon.vue | 1 +
src/components/DraggableLists.vue | 104 +++
src/components/NavbarTop.vue | 2 +-
src/components/modals/BootstrapModal.vue | 2 +-
.../modals/BucketDetailModal.vue | 1 +
.../ParameterSchemaFormComponent.vue | 51 +-
.../form-mode/ParameterBooleanInput.vue | 15 +-
.../form-mode/ParameterEnumInput.vue | 26 +-
.../form-mode/ParameterGroupForm.vue | 89 +-
.../form-mode/ParameterNumberInput.vue | 20 +-
.../workflows/WorkflowDocumentationTabs.vue | 2 +-
.../workflows/WorkflowWithVersionsCard.vue | 73 +-
.../workflows/modals/ParameterModal.vue | 9 +-
.../modals/UpdateWorkflowCredentialsModal.vue | 3 +-
.../workflows/modals/UpdateWorkflowModal.vue | 1 +
src/router/workflowRoutes.ts | 12 +
src/utils/DownloadJson.ts | 6 +
src/views/admin/AdminResourcesView.vue | 2 +-
src/views/admin/AdminUsersView.vue | 2 +-
src/views/object-storage/BucketsView.vue | 5 +-
src/views/object-storage/S3KeysView.vue | 4 +-
src/views/resources/ListResourcesView.vue | 2 +-
src/views/resources/MyResourcesView.vue | 2 +-
src/views/resources/ReviewResourceView.vue | 2 +-
src/views/workflows/ArbitraryWorkflowView.vue | 16 +-
src/views/workflows/CreateClowmInfoView.vue | 565 ++++++++++++
.../workflows/ListWorkflowExecutionsView.vue | 2 +-
src/views/workflows/ListWorkflowsView.vue | 14 +-
src/views/workflows/MyWorkflowsView.vue | 2 +-
src/views/workflows/ReviewWorkflowsView.vue | 2 +-
src/views/workflows/StartWorkflowView.vue | 20 +-
35 files changed, 1279 insertions(+), 596 deletions(-)
create mode 100644 src/components/DraggableLists.vue
create mode 100644 src/utils/DownloadJson.ts
create mode 100644 src/views/workflows/CreateClowmInfoView.vue
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index dc9685d..7f2ea9f 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -13,6 +13,7 @@ default:
- docker
before_script:
- npm --version # For debugging
+ - node --version
- npm install --no-fund
lint:
diff --git a/package-lock.json b/package-lock.json
index fd24c5c..d350098 100644
--- a/package-lock.json
+++ b/package-lock.json
@@ -25,6 +25,7 @@
"pinia": "~2.1.0",
"semver": "~7.5.0",
"showdown": "~2.1.0",
+ "sortablejs": "^1.15.2",
"vue": "~3.4.0",
"vue-router": "~4.2.0",
"vue3-cookies": "~1.0.0"
@@ -39,6 +40,7 @@
"@types/node": "^18.19.5",
"@types/semver": "~7.5.1",
"@types/showdown": "~2.0.1",
+ "@types/sortablejs": "^1.15.7",
"@vitejs/plugin-vue": "~5.0.0",
"@vue/eslint-config-prettier": "~8.0.0",
"@vue/eslint-config-typescript": "~11.0.3",
@@ -211,33 +213,33 @@
"integrity": "sha512-Xni35NKzjgMrwevysHTCArtLDpPvye8zV/0E4EyYn43P7/7qvQwPh9BGkHewbMulVntbigmcT7rdX3BNo9wRJg=="
},
"node_modules/@aws-sdk/client-s3": {
- "version": "3.507.0",
- "resolved": "https://registry.npmjs.org/@aws-sdk/client-s3/-/client-s3-3.507.0.tgz",
- "integrity": "sha512-rRLiC5Ly3e7kZVNoRsG6JhZ8Yat5uEnDeShdWNdHchyTO88AaEnHaeyiVG9ecmKI8jYl6NbWSHB8xL0l9KIr/w==",
+ "version": "3.511.0",
+ "resolved": "https://registry.npmjs.org/@aws-sdk/client-s3/-/client-s3-3.511.0.tgz",
+ "integrity": "sha512-IRUYev0KNKa5rQrpULE9IhJW6dhgGQWBmAJI+OyITHMu3uGvVHDqWKqnShV0IfMJWg1y37I3juFJ1KAti8jyHw==",
"dependencies": {
"@aws-crypto/sha1-browser": "3.0.0",
"@aws-crypto/sha256-browser": "3.0.0",
"@aws-crypto/sha256-js": "3.0.0",
- "@aws-sdk/client-sts": "3.507.0",
- "@aws-sdk/core": "3.496.0",
- "@aws-sdk/credential-provider-node": "3.507.0",
- "@aws-sdk/middleware-bucket-endpoint": "3.502.0",
- "@aws-sdk/middleware-expect-continue": "3.502.0",
- "@aws-sdk/middleware-flexible-checksums": "3.502.0",
- "@aws-sdk/middleware-host-header": "3.502.0",
- "@aws-sdk/middleware-location-constraint": "3.502.0",
- "@aws-sdk/middleware-logger": "3.502.0",
- "@aws-sdk/middleware-recursion-detection": "3.502.0",
- "@aws-sdk/middleware-sdk-s3": "3.502.0",
- "@aws-sdk/middleware-signing": "3.502.0",
- "@aws-sdk/middleware-ssec": "3.502.0",
- "@aws-sdk/middleware-user-agent": "3.502.0",
- "@aws-sdk/region-config-resolver": "3.502.0",
- "@aws-sdk/signature-v4-multi-region": "3.502.0",
- "@aws-sdk/types": "3.502.0",
- "@aws-sdk/util-endpoints": "3.502.0",
- "@aws-sdk/util-user-agent-browser": "3.502.0",
- "@aws-sdk/util-user-agent-node": "3.502.0",
+ "@aws-sdk/client-sts": "3.511.0",
+ "@aws-sdk/core": "3.511.0",
+ "@aws-sdk/credential-provider-node": "3.511.0",
+ "@aws-sdk/middleware-bucket-endpoint": "3.511.0",
+ "@aws-sdk/middleware-expect-continue": "3.511.0",
+ "@aws-sdk/middleware-flexible-checksums": "3.511.0",
+ "@aws-sdk/middleware-host-header": "3.511.0",
+ "@aws-sdk/middleware-location-constraint": "3.511.0",
+ "@aws-sdk/middleware-logger": "3.511.0",
+ "@aws-sdk/middleware-recursion-detection": "3.511.0",
+ "@aws-sdk/middleware-sdk-s3": "3.511.0",
+ "@aws-sdk/middleware-signing": "3.511.0",
+ "@aws-sdk/middleware-ssec": "3.511.0",
+ "@aws-sdk/middleware-user-agent": "3.511.0",
+ "@aws-sdk/region-config-resolver": "3.511.0",
+ "@aws-sdk/signature-v4-multi-region": "3.511.0",
+ "@aws-sdk/types": "3.511.0",
+ "@aws-sdk/util-endpoints": "3.511.0",
+ "@aws-sdk/util-user-agent-browser": "3.511.0",
+ "@aws-sdk/util-user-agent-node": "3.511.0",
"@aws-sdk/xml-builder": "3.496.0",
"@smithy/config-resolver": "^2.1.1",
"@smithy/core": "^1.3.1",
@@ -279,22 +281,22 @@
}
},
"node_modules/@aws-sdk/client-sso": {
- "version": "3.507.0",
- "resolved": "https://registry.npmjs.org/@aws-sdk/client-sso/-/client-sso-3.507.0.tgz",
- "integrity": "sha512-pFeaKwqv4tXD6QVxWC2V4N62DUoP3bPSm/mCe2SPhaNjNsmwwA53viUHz/nwxIbs8w4vV44UQsygb0AgKm+HoQ==",
+ "version": "3.511.0",
+ "resolved": "https://registry.npmjs.org/@aws-sdk/client-sso/-/client-sso-3.511.0.tgz",
+ "integrity": "sha512-v1f5ZbuZWpad+fgTOpgFyIZT3A37wdqoSPh0hl+cKRu5kPsz96xCe9+UvLx+HdN2yJ/mV0UZcMq6ysj4xAGIEg==",
"dependencies": {
"@aws-crypto/sha256-browser": "3.0.0",
"@aws-crypto/sha256-js": "3.0.0",
- "@aws-sdk/core": "3.496.0",
- "@aws-sdk/middleware-host-header": "3.502.0",
- "@aws-sdk/middleware-logger": "3.502.0",
- "@aws-sdk/middleware-recursion-detection": "3.502.0",
- "@aws-sdk/middleware-user-agent": "3.502.0",
- "@aws-sdk/region-config-resolver": "3.502.0",
- "@aws-sdk/types": "3.502.0",
- "@aws-sdk/util-endpoints": "3.502.0",
- "@aws-sdk/util-user-agent-browser": "3.502.0",
- "@aws-sdk/util-user-agent-node": "3.502.0",
+ "@aws-sdk/core": "3.511.0",
+ "@aws-sdk/middleware-host-header": "3.511.0",
+ "@aws-sdk/middleware-logger": "3.511.0",
+ "@aws-sdk/middleware-recursion-detection": "3.511.0",
+ "@aws-sdk/middleware-user-agent": "3.511.0",
+ "@aws-sdk/region-config-resolver": "3.511.0",
+ "@aws-sdk/types": "3.511.0",
+ "@aws-sdk/util-endpoints": "3.511.0",
+ "@aws-sdk/util-user-agent-browser": "3.511.0",
+ "@aws-sdk/util-user-agent-node": "3.511.0",
"@smithy/config-resolver": "^2.1.1",
"@smithy/core": "^1.3.1",
"@smithy/fetch-http-handler": "^2.4.1",
@@ -326,24 +328,24 @@
}
},
"node_modules/@aws-sdk/client-sso-oidc": {
- "version": "3.507.0",
- "resolved": "https://registry.npmjs.org/@aws-sdk/client-sso-oidc/-/client-sso-oidc-3.507.0.tgz",
- "integrity": "sha512-ms5CH2ImhqqCIbo5irxayByuPOlVAmSiqDVfjZKwgIziqng2bVgNZMeKcT6t0bmrcgScEAVnZwY7j/iZTIw73g==",
+ "version": "3.511.0",
+ "resolved": "https://registry.npmjs.org/@aws-sdk/client-sso-oidc/-/client-sso-oidc-3.511.0.tgz",
+ "integrity": "sha512-cITRRq54eTrq7ll9li+yYnLbNHKXG2P+ovdZSDiQ6LjCYBdcD4ela30qbs87Yye9YsopdslDzBhHHtrf5oiuMw==",
"dependencies": {
"@aws-crypto/sha256-browser": "3.0.0",
"@aws-crypto/sha256-js": "3.0.0",
- "@aws-sdk/client-sts": "3.507.0",
- "@aws-sdk/core": "3.496.0",
- "@aws-sdk/middleware-host-header": "3.502.0",
- "@aws-sdk/middleware-logger": "3.502.0",
- "@aws-sdk/middleware-recursion-detection": "3.502.0",
- "@aws-sdk/middleware-signing": "3.502.0",
- "@aws-sdk/middleware-user-agent": "3.502.0",
- "@aws-sdk/region-config-resolver": "3.502.0",
- "@aws-sdk/types": "3.502.0",
- "@aws-sdk/util-endpoints": "3.502.0",
- "@aws-sdk/util-user-agent-browser": "3.502.0",
- "@aws-sdk/util-user-agent-node": "3.502.0",
+ "@aws-sdk/client-sts": "3.511.0",
+ "@aws-sdk/core": "3.511.0",
+ "@aws-sdk/middleware-host-header": "3.511.0",
+ "@aws-sdk/middleware-logger": "3.511.0",
+ "@aws-sdk/middleware-recursion-detection": "3.511.0",
+ "@aws-sdk/middleware-signing": "3.511.0",
+ "@aws-sdk/middleware-user-agent": "3.511.0",
+ "@aws-sdk/region-config-resolver": "3.511.0",
+ "@aws-sdk/types": "3.511.0",
+ "@aws-sdk/util-endpoints": "3.511.0",
+ "@aws-sdk/util-user-agent-browser": "3.511.0",
+ "@aws-sdk/util-user-agent-node": "3.511.0",
"@smithy/config-resolver": "^2.1.1",
"@smithy/core": "^1.3.1",
"@smithy/fetch-http-handler": "^2.4.1",
@@ -374,26 +376,26 @@
"node": ">=14.0.0"
},
"peerDependencies": {
- "@aws-sdk/credential-provider-node": "^3.507.0"
+ "@aws-sdk/credential-provider-node": "^3.511.0"
}
},
"node_modules/@aws-sdk/client-sts": {
- "version": "3.507.0",
- "resolved": "https://registry.npmjs.org/@aws-sdk/client-sts/-/client-sts-3.507.0.tgz",
- "integrity": "sha512-TOWBe0ApEh32QOib0R+irWGjd1F9wnhbGV5PcB9SakyRwvqwG5MKOfYxG7ocoDqLlaRwzZMidcy/PV8/OEVNKg==",
+ "version": "3.511.0",
+ "resolved": "https://registry.npmjs.org/@aws-sdk/client-sts/-/client-sts-3.511.0.tgz",
+ "integrity": "sha512-lwVEEXK+1auEwmBuTv35m2GvbxPthi8SjNUpU4pRetZPVbGhnhCN6H7JqeMDP6GLf81Io2eySXRsmLMt7l/fjg==",
"dependencies": {
"@aws-crypto/sha256-browser": "3.0.0",
"@aws-crypto/sha256-js": "3.0.0",
- "@aws-sdk/core": "3.496.0",
- "@aws-sdk/middleware-host-header": "3.502.0",
- "@aws-sdk/middleware-logger": "3.502.0",
- "@aws-sdk/middleware-recursion-detection": "3.502.0",
- "@aws-sdk/middleware-user-agent": "3.502.0",
- "@aws-sdk/region-config-resolver": "3.502.0",
- "@aws-sdk/types": "3.502.0",
- "@aws-sdk/util-endpoints": "3.502.0",
- "@aws-sdk/util-user-agent-browser": "3.502.0",
- "@aws-sdk/util-user-agent-node": "3.502.0",
+ "@aws-sdk/core": "3.511.0",
+ "@aws-sdk/middleware-host-header": "3.511.0",
+ "@aws-sdk/middleware-logger": "3.511.0",
+ "@aws-sdk/middleware-recursion-detection": "3.511.0",
+ "@aws-sdk/middleware-user-agent": "3.511.0",
+ "@aws-sdk/region-config-resolver": "3.511.0",
+ "@aws-sdk/types": "3.511.0",
+ "@aws-sdk/util-endpoints": "3.511.0",
+ "@aws-sdk/util-user-agent-browser": "3.511.0",
+ "@aws-sdk/util-user-agent-node": "3.511.0",
"@smithy/config-resolver": "^2.1.1",
"@smithy/core": "^1.3.1",
"@smithy/fetch-http-handler": "^2.4.1",
@@ -426,13 +428,13 @@
"node": ">=14.0.0"
},
"peerDependencies": {
- "@aws-sdk/credential-provider-node": "^3.507.0"
+ "@aws-sdk/credential-provider-node": "^3.511.0"
}
},
"node_modules/@aws-sdk/core": {
- "version": "3.496.0",
- "resolved": "https://registry.npmjs.org/@aws-sdk/core/-/core-3.496.0.tgz",
- "integrity": "sha512-yT+ug7Cw/3eJi7x2es0+46x12+cIJm5Xv+GPWsrTFD1TKgqO/VPEgfDtHFagDNbFmjNQA65Ygc/kEdIX9ICX/A==",
+ "version": "3.511.0",
+ "resolved": "https://registry.npmjs.org/@aws-sdk/core/-/core-3.511.0.tgz",
+ "integrity": "sha512-0gbDvQhToyLxPyr/7KP6uavrBYKh7exld2lju1Lp65U61XgEjTVP/thJmHTvH4BAKGSqeIz/rrwJ0KrC8nwBtw==",
"dependencies": {
"@smithy/core": "^1.3.1",
"@smithy/protocol-http": "^3.1.1",
@@ -446,11 +448,11 @@
}
},
"node_modules/@aws-sdk/credential-provider-env": {
- "version": "3.502.0",
- "resolved": "https://registry.npmjs.org/@aws-sdk/credential-provider-env/-/credential-provider-env-3.502.0.tgz",
- "integrity": "sha512-KIB8Ae1Z7domMU/jU4KiIgK4tmYgvuXlhR54ehwlVHxnEoFPoPuGHFZU7oFn79jhhSLUFQ1lRYMxP0cEwb7XeQ==",
+ "version": "3.511.0",
+ "resolved": "https://registry.npmjs.org/@aws-sdk/credential-provider-env/-/credential-provider-env-3.511.0.tgz",
+ "integrity": "sha512-4VUsnLRox8YzxnZwnFrfZM4bL5KKLhsjjjX7oiuLyzFkhauI4HFYt7rTB8YNGphpqAg/Wzw5DBZfO3Bw1iR1HA==",
"dependencies": {
- "@aws-sdk/types": "3.502.0",
+ "@aws-sdk/types": "3.511.0",
"@smithy/property-provider": "^2.1.1",
"@smithy/types": "^2.9.1",
"tslib": "^2.5.0"
@@ -460,11 +462,11 @@
}
},
"node_modules/@aws-sdk/credential-provider-http": {
- "version": "3.503.1",
- "resolved": "https://registry.npmjs.org/@aws-sdk/credential-provider-http/-/credential-provider-http-3.503.1.tgz",
- "integrity": "sha512-rTdlFFGoPPFMF2YjtlfRuSgKI+XsF49u7d98255hySwhsbwd3Xp+utTTPquxP+CwDxMHbDlI7NxDzFiFdsoZug==",
+ "version": "3.511.0",
+ "resolved": "https://registry.npmjs.org/@aws-sdk/credential-provider-http/-/credential-provider-http-3.511.0.tgz",
+ "integrity": "sha512-y83Gt8GPpgMe/lMFxIq+0G2rbzLTC6lhrDocHUzqcApLD6wet8Esy2iYckSRlJgYY+qsVAzpLrSMtt85DwRPTw==",
"dependencies": {
- "@aws-sdk/types": "3.502.0",
+ "@aws-sdk/types": "3.511.0",
"@smithy/fetch-http-handler": "^2.4.1",
"@smithy/node-http-handler": "^2.3.1",
"@smithy/property-provider": "^2.1.1",
@@ -479,16 +481,16 @@
}
},
"node_modules/@aws-sdk/credential-provider-ini": {
- "version": "3.507.0",
- "resolved": "https://registry.npmjs.org/@aws-sdk/credential-provider-ini/-/credential-provider-ini-3.507.0.tgz",
- "integrity": "sha512-2CnyduoR9COgd7qH1LPYK8UggGqVs8R4ASDMB5bwGxbg9ZerlStDiHpqvJNNg1k+VlejBr++utxfmHd236XgmQ==",
- "dependencies": {
- "@aws-sdk/client-sts": "3.507.0",
- "@aws-sdk/credential-provider-env": "3.502.0",
- "@aws-sdk/credential-provider-process": "3.502.0",
- "@aws-sdk/credential-provider-sso": "3.507.0",
- "@aws-sdk/credential-provider-web-identity": "3.507.0",
- "@aws-sdk/types": "3.502.0",
+ "version": "3.511.0",
+ "resolved": "https://registry.npmjs.org/@aws-sdk/credential-provider-ini/-/credential-provider-ini-3.511.0.tgz",
+ "integrity": "sha512-AgIOCtYzm61jbTQCY/2Vf/yu7DeLG0TLZa05a3VVRN9XE4ERtEnMn7TdbxM+hS24MTX8xI0HbMcWxCBkXRIg9w==",
+ "dependencies": {
+ "@aws-sdk/client-sts": "3.511.0",
+ "@aws-sdk/credential-provider-env": "3.511.0",
+ "@aws-sdk/credential-provider-process": "3.511.0",
+ "@aws-sdk/credential-provider-sso": "3.511.0",
+ "@aws-sdk/credential-provider-web-identity": "3.511.0",
+ "@aws-sdk/types": "3.511.0",
"@smithy/credential-provider-imds": "^2.2.1",
"@smithy/property-provider": "^2.1.1",
"@smithy/shared-ini-file-loader": "^2.3.1",
@@ -500,17 +502,17 @@
}
},
"node_modules/@aws-sdk/credential-provider-node": {
- "version": "3.507.0",
- "resolved": "https://registry.npmjs.org/@aws-sdk/credential-provider-node/-/credential-provider-node-3.507.0.tgz",
- "integrity": "sha512-tkQnmOLkRBXfMLgDYHzogrqTNdtl0Im0ipzJb2IV5hfM5NoTfCf795e9A9isgwjSP/g/YEU0xQWxa4lq8LRtuA==",
- "dependencies": {
- "@aws-sdk/credential-provider-env": "3.502.0",
- "@aws-sdk/credential-provider-http": "3.503.1",
- "@aws-sdk/credential-provider-ini": "3.507.0",
- "@aws-sdk/credential-provider-process": "3.502.0",
- "@aws-sdk/credential-provider-sso": "3.507.0",
- "@aws-sdk/credential-provider-web-identity": "3.507.0",
- "@aws-sdk/types": "3.502.0",
+ "version": "3.511.0",
+ "resolved": "https://registry.npmjs.org/@aws-sdk/credential-provider-node/-/credential-provider-node-3.511.0.tgz",
+ "integrity": "sha512-5JDZXsSluliJmxOF+lYYFgJdSKQfVLQyic5NxScHULTERGoEwEHMgucFGwJ9MV9FoINjNTQLfAiWlJL/kGkCEQ==",
+ "dependencies": {
+ "@aws-sdk/credential-provider-env": "3.511.0",
+ "@aws-sdk/credential-provider-http": "3.511.0",
+ "@aws-sdk/credential-provider-ini": "3.511.0",
+ "@aws-sdk/credential-provider-process": "3.511.0",
+ "@aws-sdk/credential-provider-sso": "3.511.0",
+ "@aws-sdk/credential-provider-web-identity": "3.511.0",
+ "@aws-sdk/types": "3.511.0",
"@smithy/credential-provider-imds": "^2.2.1",
"@smithy/property-provider": "^2.1.1",
"@smithy/shared-ini-file-loader": "^2.3.1",
@@ -522,11 +524,11 @@
}
},
"node_modules/@aws-sdk/credential-provider-process": {
- "version": "3.502.0",
- "resolved": "https://registry.npmjs.org/@aws-sdk/credential-provider-process/-/credential-provider-process-3.502.0.tgz",
- "integrity": "sha512-fJJowOjQ4infYQX0E1J3xFVlmuwEYJAFk0Mo1qwafWmEthsBJs+6BR2RiWDELHKrSK35u4Pf3fu3RkYuCtmQFw==",
+ "version": "3.511.0",
+ "resolved": "https://registry.npmjs.org/@aws-sdk/credential-provider-process/-/credential-provider-process-3.511.0.tgz",
+ "integrity": "sha512-88hLUPqcTwjSubPS+34ZfmglnKeLny8GbmZsyllk96l26PmDTAqo5RScSA8BWxL0l5pRRWGtcrFyts+oibHIuQ==",
"dependencies": {
- "@aws-sdk/types": "3.502.0",
+ "@aws-sdk/types": "3.511.0",
"@smithy/property-provider": "^2.1.1",
"@smithy/shared-ini-file-loader": "^2.3.1",
"@smithy/types": "^2.9.1",
@@ -537,13 +539,13 @@
}
},
"node_modules/@aws-sdk/credential-provider-sso": {
- "version": "3.507.0",
- "resolved": "https://registry.npmjs.org/@aws-sdk/credential-provider-sso/-/credential-provider-sso-3.507.0.tgz",
- "integrity": "sha512-6WBjou52QukFpDi4ezb19bcAx/bM8ge8qnJnRT02WVRmU6zFQ5yLD2fW1MFsbX3cwbey+wSqKd5FGE1Hukd5wQ==",
+ "version": "3.511.0",
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+ "resolved": "https://registry.npmjs.org/@aws-sdk/middleware-expect-continue/-/middleware-expect-continue-3.511.0.tgz",
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@@ -652,11 +654,11 @@
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@@ -678,11 +680,11 @@
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@@ -692,11 +694,11 @@
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@@ -728,11 +730,11 @@
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@@ -741,12 +743,12 @@
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@@ -756,11 +758,11 @@
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@@ -790,12 +792,12 @@
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@@ -806,12 +808,12 @@
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+ "resolved": "https://registry.npmjs.org/@aws-sdk/token-providers/-/token-providers-3.511.0.tgz",
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@@ -822,9 +824,9 @@
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@@ -845,11 +847,11 @@
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+ "resolved": "https://registry.npmjs.org/@aws-sdk/util-endpoints/-/util-endpoints-3.511.0.tgz",
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@@ -859,11 +861,11 @@
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}
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"funding": {
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@@ -6019,6 +6047,11 @@
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+ "version": "1.15.2",
+ "resolved": "https://registry.npmjs.org/sortablejs/-/sortablejs-1.15.2.tgz",
+ "integrity": "sha512-FJF5jgdfvoKn1MAKSdGs33bIqLi3LmsgVTliuX6iITj834F+JRQZN90Z93yql8h0K2t0RwDPBmxwlbZfDcxNZA=="
+ },
"node_modules/source-map": {
"version": "0.6.1",
"resolved": "https://registry.npmjs.org/source-map/-/source-map-0.6.1.tgz",
@@ -6070,9 +6103,9 @@
}
},
"node_modules/spdx-license-ids": {
- "version": "3.0.16",
- "resolved": "https://registry.npmjs.org/spdx-license-ids/-/spdx-license-ids-3.0.16.tgz",
- "integrity": "sha512-eWN+LnM3GR6gPu35WxNgbGl8rmY1AEmoMDvL/QD6zYmPWgywxWqJWNdLGT+ke8dKNWrcYgYjPpG5gbTfghP8rw==",
+ "version": "3.0.17",
+ "resolved": "https://registry.npmjs.org/spdx-license-ids/-/spdx-license-ids-3.0.17.tgz",
+ "integrity": "sha512-sh8PWc/ftMqAAdFiBu6Fy6JUOYjqDJBJvIhpfDMyHrr0Rbp5liZqd4TjtQ/RgfLjKFZb+LMx5hpml5qOWy0qvg==",
"dev": true
},
"node_modules/stream-browserify": {
@@ -6301,14 +6334,14 @@
}
},
"node_modules/typed-array-buffer": {
- "version": "1.0.0",
- "resolved": "https://registry.npmjs.org/typed-array-buffer/-/typed-array-buffer-1.0.0.tgz",
- "integrity": "sha512-Y8KTSIglk9OZEr8zywiIHG/kmQ7KWyjseXs1CbSo8vC42w7hg2HgYTxSWwP0+is7bWDc1H+Fo026CpHFwm8tkw==",
+ "version": "1.0.1",
+ "resolved": "https://registry.npmjs.org/typed-array-buffer/-/typed-array-buffer-1.0.1.tgz",
+ "integrity": "sha512-RSqu1UEuSlrBhHTWC8O9FnPjOduNs4M7rJ4pRKoEjtx1zUNOPN2sSXHLDX+Y2WPbHIxbvg4JFo2DNAEfPIKWoQ==",
"dev": true,
"dependencies": {
- "call-bind": "^1.0.2",
- "get-intrinsic": "^1.2.1",
- "is-typed-array": "^1.1.10"
+ "call-bind": "^1.0.6",
+ "es-errors": "^1.3.0",
+ "is-typed-array": "^1.1.13"
},
"engines": {
"node": ">= 0.4"
@@ -6914,15 +6947,15 @@
}
},
"node_modules/vue": {
- "version": "3.4.15",
- "resolved": "https://registry.npmjs.org/vue/-/vue-3.4.15.tgz",
- "integrity": "sha512-jC0GH4KkWLWJOEQjOpkqU1bQsBwf4R1rsFtw5GQJbjHVKWDzO6P0nWWBTmjp1xSemAioDFj1jdaK1qa3DnMQoQ==",
- "dependencies": {
- "@vue/compiler-dom": "3.4.15",
- "@vue/compiler-sfc": "3.4.15",
- "@vue/runtime-dom": "3.4.15",
- "@vue/server-renderer": "3.4.15",
- "@vue/shared": "3.4.15"
+ "version": "3.4.19",
+ "resolved": "https://registry.npmjs.org/vue/-/vue-3.4.19.tgz",
+ "integrity": "sha512-W/7Fc9KUkajFU8dBeDluM4sRGc/aa4YJnOYck8dkjgZoXtVsn3OeTGni66FV1l3+nvPA7VBFYtPioaGKUmEADw==",
+ "dependencies": {
+ "@vue/compiler-dom": "3.4.19",
+ "@vue/compiler-sfc": "3.4.19",
+ "@vue/runtime-dom": "3.4.19",
+ "@vue/server-renderer": "3.4.19",
+ "@vue/shared": "3.4.19"
},
"peerDependencies": {
"typescript": "*"
diff --git a/package.json b/package.json
index ef34c45..0d6de8d 100644
--- a/package.json
+++ b/package.json
@@ -32,6 +32,7 @@
"pinia": "~2.1.0",
"semver": "~7.5.0",
"showdown": "~2.1.0",
+ "sortablejs": "^1.15.2",
"vue": "~3.4.0",
"vue-router": "~4.2.0",
"vue3-cookies": "~1.0.0"
@@ -46,6 +47,7 @@
"@types/node": "^18.19.5",
"@types/semver": "~7.5.1",
"@types/showdown": "~2.0.1",
+ "@types/sortablejs": "^1.15.7",
"@vitejs/plugin-vue": "~5.0.0",
"@vue/eslint-config-prettier": "~8.0.0",
"@vue/eslint-config-typescript": "~11.0.3",
diff --git a/src/App.vue b/src/App.vue
index 1ae0d2e..4497959 100644
--- a/src/App.vue
+++ b/src/App.vue
@@ -87,7 +87,7 @@ onBeforeMount(() => {
<template>
<NavbarTop />
- <div class="container-xxl mt-4 flex-grow-1">
+ <div class="container-xxl mt-4 flex-grow-1 py-2">
<div
id="global-toast-container"
class="toast-container position-fixed top-toast end-0 p-3"
diff --git a/src/components/CopyToClipboardIcon.vue b/src/components/CopyToClipboardIcon.vue
index b0d34b4..6e85078 100644
--- a/src/components/CopyToClipboardIcon.vue
+++ b/src/components/CopyToClipboardIcon.vue
@@ -47,6 +47,7 @@ onMounted(() => {
</bootstrap-toast>
<button v-if="props.button" @click="copyToClipboard" class="btn btn-primary">
Copy to Clipboard
+ <font-awesome-icon icon="fa-solid fa-clipboard" class="ms-1" />
</button>
<span
v-else
diff --git a/src/components/DraggableLists.vue b/src/components/DraggableLists.vue
new file mode 100644
index 0000000..bb72d1d
--- /dev/null
+++ b/src/components/DraggableLists.vue
@@ -0,0 +1,104 @@
+<script setup lang="ts">
+import { onMounted, ref } from "vue";
+import Sortable from "sortablejs";
+
+const leftList = defineModel<string[]>("leftList", { required: true });
+const rightList = defineModel<string[]>("rightList", { required: true });
+
+const leftListElement = ref<HTMLUListElement | undefined>(undefined);
+const rightListElement = ref<HTMLUListElement | undefined>(undefined);
+
+onMounted(() => {
+ if (leftListElement.value && rightListElement.value) {
+ new Sortable(leftListElement.value, {
+ group: "shared",
+ animation: 150,
+ sort: false, // To disable sorting: set sort to false
+ onRemove: (evt) => {
+ leftList.value.splice(evt.oldIndex ?? 0, 1);
+ },
+ onAdd: (evt) => {
+ leftList.value.splice(
+ evt.newIndex ?? 0,
+ 0,
+ (evt.item as HTMLLIElement).innerText,
+ );
+ },
+ });
+
+ new Sortable(rightListElement.value, {
+ group: "shared",
+ animation: 150,
+ sort: false, // To disable sorting: set sort to false
+ onRemove: (evt) => {
+ rightList.value.splice(evt.oldIndex ?? 0, 1);
+ },
+ onAdd: (evt) => {
+ rightList.value.splice(
+ evt.newIndex ?? 0,
+ 0,
+ (evt.item as HTMLLIElement).innerText,
+ );
+ },
+ });
+ }
+});
+</script>
+
+<template>
+ <div class="row">
+ <div class="col-6 d-flex flex-column justify-content-start">
+ <h5><slot name="leftHeader" /></h5>
+ <ul
+ id="items"
+ class="list-group flex-fill border border-dashed p-1 overflow-y-scroll"
+ ref="leftListElement"
+ style="max-height: 40vh"
+ >
+ <li
+ v-for="(left, index) in leftList"
+ class="list-group-item"
+ :key="left"
+ @click="
+ rightList.push(left);
+ leftList.splice(index, 1);
+ "
+ >
+ {{ left }}
+ </li>
+ </ul>
+ </div>
+ <div class="col-6 d-flex flex-column justify-content-start">
+ <h5><slot name="rightHeader" /></h5>
+ <ul
+ id="items"
+ class="list-group flex-fill border border-dashed p-1 overflow-y-scroll"
+ ref="rightListElement"
+ style="max-height: 40vh"
+ >
+ <li
+ v-for="(right, index) in rightList"
+ class="list-group-item"
+ :key="right"
+ @click="
+ leftList.push(right);
+ rightList.splice(index, 1);
+ "
+ >
+ {{ right }}
+ </li>
+ </ul>
+ </div>
+ </div>
+</template>
+
+<style scoped>
+li:hover {
+ cursor: grab;
+ background: var(--bs-secondary-bg-subtle);
+}
+
+.border-dashed {
+ border-style: dashed !important;
+}
+</style>
diff --git a/src/components/NavbarTop.vue b/src/components/NavbarTop.vue
index 0cb939d..4a85939 100644
--- a/src/components/NavbarTop.vue
+++ b/src/components/NavbarTop.vue
@@ -189,7 +189,7 @@ watch(
<router-link
class="dropdown-item"
:to="{ name: 'resource-review' }"
- >Review
+ >Reviews
</router-link>
</li>
</ul>
diff --git a/src/components/modals/BootstrapModal.vue b/src/components/modals/BootstrapModal.vue
index 7f3a55e..cf6664b 100644
--- a/src/components/modals/BootstrapModal.vue
+++ b/src/components/modals/BootstrapModal.vue
@@ -36,7 +36,7 @@ const modalSizeClass = computed<string>(() => {
<div class="modal-title fs-5" :id="modalLabel">
<slot name="header" />
</div>
- <div>
+ <div class="d-flex align-items-center">
<slot name="extra-button" />
<button
type="button"
diff --git a/src/components/object-storage/modals/BucketDetailModal.vue b/src/components/object-storage/modals/BucketDetailModal.vue
index 49eef59..3ceebc6 100644
--- a/src/components/object-storage/modals/BucketDetailModal.vue
+++ b/src/components/object-storage/modals/BucketDetailModal.vue
@@ -15,6 +15,7 @@ const props = defineProps<{
:modalId="modalID"
:static-backdrop="false"
modal-label="Bucket Detail Modal"
+ size-modifier="lg"
>
<template v-slot:header>
<h4>
diff --git a/src/components/parameter-schema/ParameterSchemaFormComponent.vue b/src/components/parameter-schema/ParameterSchemaFormComponent.vue
index 4a93a52..4048dac 100644
--- a/src/components/parameter-schema/ParameterSchemaFormComponent.vue
+++ b/src/components/parameter-schema/ParameterSchemaFormComponent.vue
@@ -15,6 +15,7 @@ import type { ClowmInfo } from "@/types/ClowmInfo";
import UploadParameterFileModal from "@/components/parameter-schema/UploadParameterFileModal.vue";
import type {
TemporaryParams,
+ WorkflowMetaParameters,
WorkflowParameters,
} from "@/types/WorkflowParameters";
import { useWorkflowExecutionStore } from "@/stores/workflowExecutions";
@@ -55,10 +56,7 @@ const emit = defineEmits<{
(
e: "start-workflow",
parameters: WorkflowParameters,
- notes?: string,
- logs_s3_path?: string,
- debug_s3_path?: string,
- provenance_s3_path?: string,
+ metaParameters: WorkflowMetaParameters,
): void;
}>();
@@ -90,18 +88,17 @@ const launchForm = ref<HTMLFormElement | null>(null);
const formState = reactive<{
formInput: WorkflowParameters;
validated: boolean;
- pipelineNotes: string;
- logs_s3_path?: string;
- debug_s3_path?: string;
- provenance_s3_path?: string;
+ metaParameters: WorkflowMetaParameters;
errorType?: string;
}>({
formInput: {},
validated: false,
- pipelineNotes: "",
- logs_s3_path: undefined,
- debug_s3_path: undefined,
- provenance_s3_path: undefined,
+ metaParameters: {
+ logs_s3_path: undefined,
+ debug_s3_path: undefined,
+ provenance_s3_path: undefined,
+ notes: undefined,
+ },
errorType: undefined,
});
@@ -190,14 +187,7 @@ function startWorkflow() {
console.error(validateSchema.errors);
errorToast?.show();
} else {
- emit(
- "start-workflow",
- formState.formInput,
- formState.pipelineNotes,
- formState.logs_s3_path,
- formState.debug_s3_path,
- formState.provenance_s3_path,
- );
+ emit("start-workflow", formState.formInput, formState.metaParameters);
}
} else {
formState.errorType = "form";
@@ -212,10 +202,7 @@ function loadParameters(tempParams?: TemporaryParams) {
formState.formInput[param] = tempParams.params[param];
}
}
- formState.pipelineNotes = tempParams.metaParams.notes ?? "";
- formState.logs_s3_path = tempParams.metaParams.logs_s3_path;
- formState.provenance_s3_path = tempParams.metaParams.provenance_s3_path;
- formState.debug_s3_path = tempParams.metaParams.debug_s3_path;
+ formState.metaParameters = tempParams.metaParams;
if (Object.keys(tempParams?.params ?? {}).length > 0) {
parameterLoadToast?.show();
}
@@ -232,7 +219,8 @@ function scroll(selectedAnchor: string) {
// =============================================================================
onMounted(() => {
if (props.schema) updateSchema(props.schema);
- if (props.clowmInfo?.exampleParameters) Tooltip.getOrCreateInstance("#exampleDataButton");
+ if (props.clowmInfo?.exampleParameters)
+ Tooltip.getOrCreateInstance("#exampleDataButton");
bucketRepository.fetchBuckets();
bucketRepository.fetchOwnPermissions();
keyRepository.fetchS3Keys();
@@ -271,7 +259,7 @@ onMounted(() => {
})
"
/>
- <div class="row mb-5 align-items-start">
+ <div class="row align-items-start">
<form
v-if="props.schema"
class="col-9"
@@ -283,8 +271,7 @@ onMounted(() => {
>
<template v-for="(group, groupName) in parameterGroups" :key="groupName">
<parameter-group-form
- :modelValue="formState.formInput"
- @update:model-value="(newValue) => (formState.formInput = newValue)"
+ v-model="formState.formInput"
v-if="formState.formInput"
:parameter-group-name="groupName"
:parameter-group="group"
@@ -317,7 +304,7 @@ onMounted(() => {
<textarea
class="form-control border border-secondary"
rows="2"
- v-model="formState.pipelineNotes"
+ v-model="formState.metaParameters.notes"
/>
</div>
<label class="mb-3" for="pipelineNotes"
@@ -335,7 +322,7 @@ onMounted(() => {
</span>
<parameter-string-input
parameter-name="logs_s3_path"
- v-model="formState.logs_s3_path"
+ v-model="formState.metaParameters.logs_s3_path"
:parameter="{
format: 'directory-path',
type: 'string',
@@ -358,7 +345,7 @@ onMounted(() => {
</span>
<parameter-string-input
parameter-name="provenance_s3_path"
- v-model="formState.provenance_s3_path"
+ v-model="formState.metaParameters.provenance_s3_path"
:parameter="{
format: 'directory-path',
type: 'string',
@@ -382,7 +369,7 @@ onMounted(() => {
</span>
<parameter-string-input
parameter-name="debug_s3_path"
- v-model="formState.debug_s3_path"
+ v-model="formState.metaParameters.debug_s3_path"
:parameter="{
format: 'directory-path',
type: 'string',
diff --git a/src/components/parameter-schema/form-mode/ParameterBooleanInput.vue b/src/components/parameter-schema/form-mode/ParameterBooleanInput.vue
index a30bd4e..54e519c 100644
--- a/src/components/parameter-schema/form-mode/ParameterBooleanInput.vue
+++ b/src/components/parameter-schema/form-mode/ParameterBooleanInput.vue
@@ -1,6 +1,8 @@
<script setup lang="ts">
import { computed } from "vue";
+const model = defineModel<boolean | undefined>({ required: true });
+
const props = defineProps({
parameter: {
type: Object,
@@ -14,9 +16,6 @@ const props = defineProps({
type: String,
required: true,
},
- modelValue: {
- type: Boolean,
- },
helpId: {
type: String,
},
@@ -26,10 +25,6 @@ const randomIDSuffix = Math.random().toString(16).substring(2, 8);
const helpTextPresent = computed<boolean>(() => props.parameter["help_text"]);
const iconPresent = computed<boolean>(() => props.parameter["fa_icon"]);
-
-const emit = defineEmits<{
- (e: "update:modelValue", value: boolean): void;
-}>();
</script>
<template>
@@ -47,8 +42,7 @@ const emit = defineEmits<{
:name="'inlineRadioOptions' + randomIDSuffix"
:id="'trueOption' + randomIDSuffix"
:value="true"
- :checked="props.modelValue"
- @input="emit('update:modelValue', true)"
+ v-model="model"
/>
</div>
<div class="form-check form-check-inline">
@@ -58,8 +52,7 @@ const emit = defineEmits<{
:name="'inlineRadioOptions' + randomIDSuffix"
:id="'falseOption' + randomIDSuffix"
:value="false"
- @input="emit('update:modelValue', false)"
- :checked="!props.modelValue"
+ v-model="model"
/>
<label class="form-check-label" :for="'falseOption' + randomIDSuffix"
>False</label
diff --git a/src/components/parameter-schema/form-mode/ParameterEnumInput.vue b/src/components/parameter-schema/form-mode/ParameterEnumInput.vue
index 03ec622..a92092c 100644
--- a/src/components/parameter-schema/form-mode/ParameterEnumInput.vue
+++ b/src/components/parameter-schema/form-mode/ParameterEnumInput.vue
@@ -1,5 +1,7 @@
<script setup lang="ts">
-import { computed, ref } from "vue";
+import { computed } from "vue";
+
+const model = defineModel<string | undefined>({ required: true });
const props = defineProps({
parameter: {
@@ -14,41 +16,23 @@ const props = defineProps({
type: String,
required: true,
},
- modelValue: {
- type: String,
- },
helpId: {
type: String,
},
});
const possibleValues = computed<string[]>(() => props.parameter["enum"]);
-
-const enumSelection = ref<HTMLSelectElement | undefined>(undefined);
-
-const emit = defineEmits<{
- (e: "update:modelValue", value: string | undefined): void;
-}>();
-
-function updateValue() {
- emit("update:modelValue", enumSelection.value?.value);
-}
</script>
<template>
<select
ref="enumSelection"
- :value="props.modelValue"
- @input="updateValue"
+ v-model="model"
class="form-select border border-secondary"
:required="required"
:aria-describedby="props.helpId"
>
- <option
- v-for="val in possibleValues"
- :key="val"
- :selected="props.modelValue === val"
- >
+ <option v-for="val in possibleValues" :key="val">
{{ val }}
</option>
</select>
diff --git a/src/components/parameter-schema/form-mode/ParameterGroupForm.vue b/src/components/parameter-schema/form-mode/ParameterGroupForm.vue
index be65227..9d4b0f3 100644
--- a/src/components/parameter-schema/form-mode/ParameterGroupForm.vue
+++ b/src/components/parameter-schema/form-mode/ParameterGroupForm.vue
@@ -1,11 +1,14 @@
<script setup lang="ts">
import FontAwesomeIcon from "@/components/FontAwesomeIcon.vue";
-import { computed, type PropType, watch } from "vue";
+import { computed, type PropType } from "vue";
import ParameterNumberInput from "@/components/parameter-schema/form-mode/ParameterNumberInput.vue";
import MarkdownRenderer from "@/components/MarkdownRenderer.vue";
import ParameterBooleanInput from "@/components/parameter-schema/form-mode/ParameterBooleanInput.vue";
import ParameterEnumInput from "@/components/parameter-schema/form-mode/ParameterEnumInput.vue";
import ParameterStringInput from "@/components/parameter-schema/form-mode/ParameterStringInput.vue";
+import type { WorkflowParameters } from "@/types/WorkflowParameters";
+
+const model = defineModel<WorkflowParameters>({ required: true });
const props = defineProps({
parameterGroup: {
@@ -19,10 +22,6 @@ const props = defineProps({
type: String,
required: true,
},
- modelValue: {
- type: Object,
- required: true,
- },
showHidden: {
type: Boolean,
default: false,
@@ -52,14 +51,6 @@ const parameters = computed<Record<string, never>>(
() => props.parameterGroup["properties"],
);
-const formInput = computed(() => props.modelValue);
-const emit = defineEmits<{
- (
- e: "update:modelValue",
- value: Record<string, number | string | boolean | undefined>,
- ): void;
-}>();
-
function parameterRequired(
// eslint-disable-next-line @typescript-eslint/no-explicit-any
parameterGroup: Record<string, any>,
@@ -68,20 +59,10 @@ function parameterRequired(
return (
parameterGroup["required"]?.includes(parameterName) || // parameter is required
parameterGroup["dependentRequired"]?.[parameterName] // parameter is required when another parameter is set
- ?.map((param: string) => formInput.value[param])
+ ?.map((param: string) => model.value[param])
?.reduce((acc: boolean, val: string) => acc || val, false)
);
}
-
-watch(
- formInput,
- (newVal) => {
- emit("update:modelValue", newVal);
- },
- {
- deep: true,
- },
-);
</script>
<template>
@@ -120,50 +101,48 @@ watch(
>
<font-awesome-icon :icon="parameter['fa_icon']" />
</span>
- <parameter-number-input
+ <template
v-if="
parameter['type'] === 'number' ||
parameter['type'] === 'integer'
"
- :parameter-name="parameterName"
- :parameter="parameter"
- :help-id="parameterName + '-help'"
- :required="parameterRequired(parameterGroup, parameterName)"
- :model-value="formInput[parameterName]"
- @update:model-value="
- (newValue) => (formInput[parameterName] = newValue)
- "
- />
- <parameter-boolean-input
- v-else-if="parameter['type'] === 'boolean'"
- :parameter-name="parameterName"
- :parameter="parameter"
- :help-id="parameterName + '-help'"
- :model-value="formInput[parameterName]"
- @update:model-value="
- (newValue) => (formInput[parameterName] = newValue)
- "
- />
- <template v-else-if="parameter['type'] === 'string'">
- <parameter-enum-input
- v-if="parameter['enum']"
+ >
+ <!-- @vue-ignore -->
+ <parameter-number-input
:parameter-name="parameterName"
:parameter="parameter"
- :model-value="formInput[parameterName]"
+ :help-id="parameterName + '-help'"
:required="parameterRequired(parameterGroup, parameterName)"
- @update:model-value="
- (newValue) => (formInput[parameterName] = newValue)
- "
+ v-model="model[parameterName]"
/>
+ </template>
+ <template v-else-if="parameter['type'] === 'boolean'">
+ <!-- @vue-ignore -->
+ <parameter-boolean-input
+ :parameter-name="parameterName"
+ :parameter="parameter"
+ :help-id="parameterName + '-help'"
+ v-model="model[parameterName]"
+ />
+ </template>
+ <template v-else-if="parameter['type'] === 'string'">
+ <!-- @vue-ignore -->
+ <template v-if="parameter['enum']">
+ <!-- @vue-ignore -->
+ <parameter-enum-input
+ :parameter-name="parameterName"
+ :parameter="parameter"
+ :required="parameterRequired(parameterGroup, parameterName)"
+ v-model="model[parameterName]"
+ />
+ </template>
+ <!-- @vue-ignore -->
<parameter-string-input
v-else
:parameter-name="parameterName"
:parameter="parameter"
- :model-value="formInput[parameterName]"
:required="parameterRequired(parameterGroup, parameterName)"
- @update:model-value="
- (newValue) => (formInput[parameterName] = newValue)
- "
+ v-model="model[parameterName]"
:remove-advanced="!showOptional"
:clowm-resource="resourceParameters?.includes(parameterName)"
/>
diff --git a/src/components/parameter-schema/form-mode/ParameterNumberInput.vue b/src/components/parameter-schema/form-mode/ParameterNumberInput.vue
index 55963a2..0cc7ca6 100644
--- a/src/components/parameter-schema/form-mode/ParameterNumberInput.vue
+++ b/src/components/parameter-schema/form-mode/ParameterNumberInput.vue
@@ -1,5 +1,6 @@
<script setup lang="ts">
-import { ref } from "vue";
+const model = defineModel<number | undefined>({ required: true });
+
const props = defineProps({
parameter: {
type: Object,
@@ -13,37 +14,22 @@ const props = defineProps({
type: String,
required: true,
},
- modelValue: {
- type: Number,
- },
helpId: {
type: String,
},
});
-
-const emit = defineEmits<{
- (e: "update:modelValue", value: number | undefined): void;
-}>();
-
-const numberInput = ref<HTMLInputElement | undefined>(undefined);
-
-function updateValue() {
- emit("update:modelValue", Number(numberInput.value?.value));
-}
</script>
<template>
<input
class="form-control border border-secondary"
type="number"
- ref="numberInput"
:max="props.parameter['maximum']"
:min="props.parameter['minimum']"
:step="props.parameter['type'] === 'integer' ? 1 : 0.0001"
- :value="props.modelValue"
+ v-model="model"
:required="props.required"
:aria-describedby="props.helpId"
- @input="updateValue"
/>
</template>
diff --git a/src/components/workflows/WorkflowDocumentationTabs.vue b/src/components/workflows/WorkflowDocumentationTabs.vue
index 7ce8afc..7ebecac 100644
--- a/src/components/workflows/WorkflowDocumentationTabs.vue
+++ b/src/components/workflows/WorkflowDocumentationTabs.vue
@@ -102,7 +102,7 @@ const activeTab = computed<string>(
></span>
</p>
</div>
- <div v-else class="px-2 pt-3 border border-top-0 mb-2">
+ <div v-else class="px-2 pt-3 border border-top-0">
<div v-if="activeTab === 'description'">
<markdown-renderer
v-if="props.descriptionMarkdown"
diff --git a/src/components/workflows/WorkflowWithVersionsCard.vue b/src/components/workflows/WorkflowWithVersionsCard.vue
index defb55e..e0a960a 100644
--- a/src/components/workflows/WorkflowWithVersionsCard.vue
+++ b/src/components/workflows/WorkflowWithVersionsCard.vue
@@ -125,27 +125,7 @@ onMounted(() => {
/>
<span>{{ props.workflow.name }}</span>
</div>
- <div>
- <button
- type="button"
- class="btn btn-outline-info me-2"
- @click="emit('workflow-update-credentials-click', props.workflow)"
- :class="{ disabled: props.loading }"
- data-bs-toggle="modal"
- data-bs-target="#updateWorkflowCredentialsModal"
- >
- <font-awesome-icon icon="fa-solid fa-key" />
- </button>
- <button
- type="button"
- class="btn btn-outline-danger me-2"
- @click="emit('workflow-delete-click', props.workflow)"
- :class="{ disabled: props.loading }"
- data-bs-toggle="modal"
- data-bs-target="#deleteWorkflowModal"
- >
- <font-awesome-icon icon="fa-solid fa-trash" />
- </button>
+ <div class="btn-group">
<button
type="button"
class="btn btn-success"
@@ -156,6 +136,56 @@ onMounted(() => {
>
Update
</button>
+ <button
+ type="button"
+ class="btn btn-success dropdown-toggle dropdown-toggle-split"
+ data-bs-toggle="dropdown"
+ aria-expanded="false"
+ >
+ <span class="visually-hidden">Toggle Dropdown</span>
+ </button>
+ <ul class="dropdown-menu z-3">
+ <li>
+ <a
+ class="dropdown-item"
+ href="#"
+ @click.prevent="
+ emit('workflow-update-credentials-click', props.workflow)
+ "
+ :class="{ disabled: props.loading }"
+ data-bs-toggle="modal"
+ data-bs-target="#updateWorkflowCredentialsModal"
+ >Update Credentials</a
+ >
+ </li>
+ <li>
+ <router-link
+ :to="{
+ name: 'workflows-clowminfo',
+ query: {
+ workflow_id: workflow.workflow_id,
+ workflow_version_id: sortedVersions(
+ props.workflow.versions,
+ )[0]?.workflow_version_id,
+ },
+ }"
+ class="btn btn-primary dropdown-item"
+ >Add Metadata
+ </router-link>
+ </li>
+ <li>
+ <a
+ class="dropdown-item text-danger"
+ href="#"
+ @click.prevent="emit('workflow-delete-click', props.workflow)"
+ :class="{ disabled: props.loading }"
+ data-bs-toggle="modal"
+ data-bs-target="#deleteWorkflowModal"
+ >Delete
+ <font-awesome-icon icon="fa-solid fa-trash" class="ms-2" />
+ </a>
+ </li>
+ </ul>
</div>
</div>
<p class="card-text" :class="{ 'text-truncate': truncateDescription }">
@@ -331,7 +361,6 @@ onMounted(() => {
}
.card-hover:hover {
- transform: translate(0, -5px);
box-shadow: 0 0.5rem 1rem rgba(0, 0, 0, 0.15) !important;
}
diff --git a/src/components/workflows/modals/ParameterModal.vue b/src/components/workflows/modals/ParameterModal.vue
index 31c33ca..5ae588a 100644
--- a/src/components/workflows/modals/ParameterModal.vue
+++ b/src/components/workflows/modals/ParameterModal.vue
@@ -9,6 +9,7 @@ import FontAwesomeIcon from "@/components/FontAwesomeIcon.vue";
import type { WorkflowExecutionOut, WorkflowVersion } from "@/client/workflow";
import { useNameStore } from "@/stores/names";
import { useWorkflowStore } from "@/stores/workflows";
+import { createDownloadUrl } from "@/utils/DownloadJson";
import type { WorkflowParameters } from "@/types/WorkflowParameters";
const nameRepository = useNameStore();
@@ -80,10 +81,10 @@ const parameterDownloadUrl = computed<string | undefined>(() => {
if (parameters.value == undefined) {
return undefined;
}
- const blob = new Blob([JSON.stringify(parameters.value, undefined, 2)], {
- type: "application/json",
- });
- return URL.createObjectURL(blob);
+ return createDownloadUrl(
+ JSON.stringify(parameters.value, null, 2),
+ "application/json",
+ );
});
const workflowName = computed<string>(() => {
diff --git a/src/components/workflows/modals/UpdateWorkflowCredentialsModal.vue b/src/components/workflows/modals/UpdateWorkflowCredentialsModal.vue
index 5da2ca9..43f6a61 100644
--- a/src/components/workflows/modals/UpdateWorkflowCredentialsModal.vue
+++ b/src/components/workflows/modals/UpdateWorkflowCredentialsModal.vue
@@ -139,6 +139,7 @@ onMounted(() => {
:modalId="modalID"
:static-backdrop="true"
modal-label="Update Workflow Version Icon Modal"
+ size-modifier="lg"
v-on="{ 'hidden.bs.modal': modalClosed }"
>
<template #header>
@@ -147,7 +148,7 @@ onMounted(() => {
</template>
<template #extra-button v-if="props.workflow.private">
<button
- class="btn delete-icon"
+ class="btn delete-icon px-1"
data-bs-toggle="modal"
:data-bs-target="'#delete-credentials-modal' + randomIDSuffix"
>
diff --git a/src/components/workflows/modals/UpdateWorkflowModal.vue b/src/components/workflows/modals/UpdateWorkflowModal.vue
index f151066..e47ea0c 100644
--- a/src/components/workflows/modals/UpdateWorkflowModal.vue
+++ b/src/components/workflows/modals/UpdateWorkflowModal.vue
@@ -316,6 +316,7 @@ onMounted(() => {
:static-backdrop="true"
modal-label="Update Workflow Modal"
v-on="{ 'hidden.bs.modal': modalClosed }"
+ size-modifier="lg"
>
<template #header>
Update Workflow
diff --git a/src/router/workflowRoutes.ts b/src/router/workflowRoutes.ts
index f4d076c..4441fcb 100644
--- a/src/router/workflowRoutes.ts
+++ b/src/router/workflowRoutes.ts
@@ -20,6 +20,18 @@ export const workflowRoutes: RouteRecordRaw[] = [
requiresDeveloperRole: true,
},
},
+ {
+ path: "developer/workflows/clowminfo",
+ name: "workflows-clowminfo",
+ component: () => import("../views/workflows/CreateClowmInfoView.vue"),
+ props: (route) => ({
+ workflow_version_id: route.query.workflow_version_id ?? undefined,
+ workflow_id: route.query.workflow_id ?? undefined,
+ }),
+ meta: {
+ requiresDeveloperRole: true,
+ },
+ },
{
path: "reviewer/workflows",
name: "workflows-reviewer",
diff --git a/src/utils/DownloadJson.ts b/src/utils/DownloadJson.ts
new file mode 100644
index 0000000..9ad1f78
--- /dev/null
+++ b/src/utils/DownloadJson.ts
@@ -0,0 +1,6 @@
+export function createDownloadUrl(content: string, mimeType?: string): string {
+ const blob = new Blob([content], {
+ type: mimeType,
+ });
+ return URL.createObjectURL(blob);
+}
diff --git a/src/views/admin/AdminResourcesView.vue b/src/views/admin/AdminResourcesView.vue
index 095336b..9528652 100644
--- a/src/views/admin/AdminResourcesView.vue
+++ b/src/views/admin/AdminResourcesView.vue
@@ -147,7 +147,7 @@ function resetForm() {
:resource="resourceState.inspectResource"
/>
<div
- class="row m-2 border-bottom mb-4 justify-content-between align-items-center"
+ class="row border-bottom mb-4 justify-content-between align-items-center"
>
<h2>Manage Resources</h2>
</div>
diff --git a/src/views/admin/AdminUsersView.vue b/src/views/admin/AdminUsersView.vue
index a1f3e14..58eeccc 100644
--- a/src/views/admin/AdminUsersView.vue
+++ b/src/views/admin/AdminUsersView.vue
@@ -43,7 +43,7 @@ function searchUsers() {
<template>
<div
- class="row m-2 border-bottom mb-4 justify-content-between align-items-center"
+ class="row border-bottom mb-4 justify-content-between align-items-center"
>
<h2>Manage Users</h2>
</div>
diff --git a/src/views/object-storage/BucketsView.vue b/src/views/object-storage/BucketsView.vue
index b19d7d8..1797014 100644
--- a/src/views/object-storage/BucketsView.vue
+++ b/src/views/object-storage/BucketsView.vue
@@ -92,11 +92,10 @@ onMounted(() => {
modalID="create-bucket-modal"
v-if="!authStore.foreignUser"
/>
- <div class="row m-2 border-bottom">
- <div class="col-12"></div>
+ <div class="row border-bottom">
<h2 class="mb-2">My Data Buckets</h2>
</div>
- <div class="row m-2 mt-4">
+ <div class="row mt-4">
<div class="col-3">
<div class="d-flex justify-content-between">
<button
diff --git a/src/views/object-storage/S3KeysView.vue b/src/views/object-storage/S3KeysView.vue
index 8fce1fe..018415a 100644
--- a/src/views/object-storage/S3KeysView.vue
+++ b/src/views/object-storage/S3KeysView.vue
@@ -80,11 +80,11 @@ onMounted(() => {
<bootstrap-toast toast-id="successKeyToast">
Successfully deleted S3 Key {{ keyState.deletedKey }}
</bootstrap-toast>
- <div class="row m-2 border-bottom mt-4">
+ <div class="row border-bottom mt-4">
<div class="col-12"></div>
<h2 class="mb-2">S3 Keys</h2>
</div>
- <div class="row m-2 mt-4">
+ <div class="row mt-4">
<div class="col-4">
<div class="d-flex justify-content-between mb-4">
<button
diff --git a/src/views/resources/ListResourcesView.vue b/src/views/resources/ListResourcesView.vue
index b615344..5787adc 100644
--- a/src/views/resources/ListResourcesView.vue
+++ b/src/views/resources/ListResourcesView.vue
@@ -53,7 +53,7 @@ onMounted(() => {
</script>
<template>
- <div class="row m-2 border-bottom mb-4">
+ <div class="row border-bottom mb-4">
<h2 class="mb-2">Available Resources</h2>
</div>
<div class="d-flex m-2 mb-3 align-items-center justify-content-start">
diff --git a/src/views/resources/MyResourcesView.vue b/src/views/resources/MyResourcesView.vue
index e9a3d23..5b2b365 100644
--- a/src/views/resources/MyResourcesView.vue
+++ b/src/views/resources/MyResourcesView.vue
@@ -62,7 +62,7 @@ onMounted(() => {
modal-id="updateResourceModal"
/>
<div
- class="row m-2 border-bottom mb-4 justify-content-between align-items-center pb-2"
+ class="row border-bottom mb-4 justify-content-between align-items-center pb-2"
>
<h2 class="w-fit">My Resources</h2>
<div class="w-fit">
diff --git a/src/views/resources/ReviewResourceView.vue b/src/views/resources/ReviewResourceView.vue
index 78f6785..e682c79 100644
--- a/src/views/resources/ReviewResourceView.vue
+++ b/src/views/resources/ReviewResourceView.vue
@@ -75,7 +75,7 @@ onMounted(() => {
:resource="resourceState.inspectResource"
/>
<div
- class="row m-2 border-bottom mb-4 justify-content-between align-items-center"
+ class="row border-bottom mb-4 justify-content-between align-items-center"
>
<h2 class="w-fit">Resource Requests</h2>
<span
diff --git a/src/views/workflows/ArbitraryWorkflowView.vue b/src/views/workflows/ArbitraryWorkflowView.vue
index a32fd64..ff7589e 100644
--- a/src/views/workflows/ArbitraryWorkflowView.vue
+++ b/src/views/workflows/ArbitraryWorkflowView.vue
@@ -11,7 +11,10 @@ import type { WorkflowIn } from "@/client/workflow";
import { useWorkflowExecutionStore } from "@/stores/workflowExecutions";
import ParameterSchemaFormComponent from "@/components/parameter-schema/ParameterSchemaFormComponent.vue";
import BootstrapToast from "@/components/BootstrapToast.vue";
-import type { WorkflowParameters } from "@/types/WorkflowParameters";
+import type {
+ WorkflowMetaParameters,
+ WorkflowParameters,
+} from "@/types/WorkflowParameters";
const props = defineProps<{
wid: string;
@@ -94,10 +97,7 @@ watch(
function startWorkflow(
parameters: WorkflowParameters,
- notes?: string,
- logs_s3_path?: string,
- debug_s3_path?: string,
- provenance_s3_path?: string,
+ metaParameters: WorkflowMetaParameters,
) {
if (workflowState.workflow) {
errorToast?.hide();
@@ -106,9 +106,9 @@ function startWorkflow(
.startDevExecution({
git_commit_hash: workflowState.workflow.git_commit_hash,
parameters: parameters,
- logs_s3_path: logs_s3_path ? logs_s3_path : undefined,
- debug_s3_path: debug_s3_path ? debug_s3_path : undefined,
- provenance_s3_path: provenance_s3_path ? provenance_s3_path : undefined,
+ logs_s3_path: metaParameters.logs_s3_path,
+ debug_s3_path: metaParameters.debug_s3_path,
+ provenance_s3_path: metaParameters.provenance_s3_path,
repository_url: workflowState.workflow.repository_url,
token: workflowState.workflow.token ?? undefined,
mode:
diff --git a/src/views/workflows/CreateClowmInfoView.vue b/src/views/workflows/CreateClowmInfoView.vue
new file mode 100644
index 0000000..8137d54
--- /dev/null
+++ b/src/views/workflows/CreateClowmInfoView.vue
@@ -0,0 +1,565 @@
+<script setup lang="ts">
+import CopyToClipboardIcon from "@/components/CopyToClipboardIcon.vue";
+import { computed, onMounted, reactive, watch } from "vue";
+import { createDownloadUrl } from "@/utils/DownloadJson";
+import type { ClowmInfo } from "@/types/ClowmInfo";
+import FontAwesomeIcon from "@/components/FontAwesomeIcon.vue";
+import { useWorkflowStore } from "@/stores/workflows";
+import { DocumentationEnum } from "@/client/workflow";
+import DraggableLists from "@/components/DraggableLists.vue";
+
+const props = defineProps<{
+ workflow_id?: string;
+ workflow_version_id?: string;
+}>();
+
+const workflowRepository = useWorkflowStore();
+
+const infoState = reactive<ClowmInfo>({
+ inputParameters: [],
+ outputParameters: [],
+ exampleParameters: undefined,
+ dois: undefined,
+ resourceParameters: undefined,
+});
+
+const parameterPools = reactive<{
+ input: string[];
+ output: string[];
+ resources: string[];
+ examples: string[];
+}>({
+ examples: [],
+ input: [],
+ output: [],
+ resources: [],
+});
+
+// eslint-disable-next-line @typescript-eslint/no-explicit-any
+const parameterSchema = computed<Record<string, Record<string, any>>>(() => {
+ const schema =
+ workflowRepository.documentationFiles[props.workflow_version_id ?? ""]
+ ?.parameter_schema;
+ const a = schema?.["properties"] ?? {};
+ for (const group in schema?.["definitions"] ?? {}) {
+ for (const param in schema?.["definitions"]?.[group]?.["properties"] ??
+ {}) {
+ a[param] = schema["definitions"][group]["properties"][param];
+ }
+ }
+ return a;
+});
+
+function getParameterType(param: string): string | undefined {
+ return parameterSchema.value[param]?.["type"];
+}
+
+const infoStateString = computed<string>(() =>
+ JSON.stringify(infoState, null, 2),
+);
+const downloadUrl = computed<string>(() =>
+ createDownloadUrl(infoStateString.value, "application/json"),
+);
+
+watch(
+ () => workflowRepository.documentationFiles[props.workflow_version_id ?? ""],
+ (newVal, old) => {
+ if (newVal != old && newVal?.parameter_schema != undefined) {
+ updateParameterPools(newVal);
+ }
+ },
+ {
+ deep: true,
+ },
+);
+
+// eslint-disable-next-line @typescript-eslint/no-explicit-any
+function updateParameterPools(newVal?: Record<DocumentationEnum, any>) {
+ if (newVal?.parameter_schema) {
+ const parameters = extractParameterList(newVal.parameter_schema);
+ parameterPools.input = parameters.slice();
+ parameterPools.output = parameters.slice();
+ parameterPools.resources = parameters.slice();
+ parameterPools.examples = parameters.slice();
+ infoState.inputParameters = [];
+ infoState.outputParameters = [];
+ infoState.exampleParameters = undefined;
+ infoState.resourceParameters = undefined;
+ }
+ if (newVal?.clowm_info && Object.keys(newVal.clowm_info).length > 0) {
+ Object.assign(infoState, JSON.parse(JSON.stringify(newVal.clowm_info)));
+ parameterPools.input = parameterPools.input.filter(
+ (param) => !infoState.inputParameters.includes(param),
+ );
+ parameterPools.resources = parameterPools.resources?.filter(
+ (param) => !infoState.resourceParameters?.includes(param),
+ );
+ parameterPools.output = parameterPools.output.filter(
+ (param) => !infoState.outputParameters.includes(param),
+ );
+ parameterPools.examples = parameterPools.examples?.filter(
+ (param) =>
+ !Object.keys(infoState.exampleParameters ?? {}).includes(param),
+ );
+ }
+}
+
+// eslint-disable-next-line @typescript-eslint/no-explicit-any
+function extractParameterList(schema: Record<string, any>): string[] {
+ const groupedParameters = Object.keys(schema["definitions"] ?? {}).reduce(
+ (acc: string[], val) => [
+ ...acc,
+ ...Object.keys(schema["definitions"][val]["properties"]),
+ ],
+ [],
+ );
+ const singleParameters = Object.keys(schema["properties"] ?? {});
+ return [...groupedParameters, ...singleParameters];
+}
+
+function addDoi() {
+ if (infoState.dois == undefined) {
+ infoState.dois = [""];
+ } else {
+ infoState.dois.push("");
+ }
+}
+
+function removeDoi(index: number) {
+ if (infoState.dois?.length === 1) {
+ infoState.dois = undefined;
+ }
+ infoState.dois?.splice(index, 1);
+}
+
+function addExampleParameter(param: string, index: number) {
+ if (infoState.exampleParameters == undefined) {
+ infoState.exampleParameters = {};
+ }
+ parameterPools.examples.splice(index, 1);
+ switch (getParameterType(param)) {
+ case "integer": {
+ infoState.exampleParameters[param] = 0;
+ break;
+ }
+ case "number": {
+ infoState.exampleParameters[param] = 0;
+ break;
+ }
+ case "boolean": {
+ infoState.exampleParameters[param] = true;
+ break;
+ }
+ case "string": {
+ infoState.exampleParameters[param] =
+ parameterSchema.value[param]?.["enum"]?.[0] ?? "";
+ break;
+ }
+ default: {
+ infoState.exampleParameters[param] = "";
+ break;
+ }
+ }
+}
+
+function deleteExampleParameter(param: string) {
+ delete infoState.exampleParameters?.[param];
+ parameterPools.examples.push(param);
+ if (Object.keys(infoState.exampleParameters ?? {}).length === 0) {
+ infoState.exampleParameters = undefined;
+ }
+}
+
+onMounted(() => {
+ if (props.workflow_id && props.workflow_version_id) {
+ Promise.all([
+ workflowRepository.fetchWorkflowDocumentation(
+ props.workflow_id,
+ props.workflow_version_id,
+ DocumentationEnum.PARAMETER_SCHEMA,
+ ),
+ workflowRepository.fetchWorkflowDocumentation(
+ props.workflow_id,
+ props.workflow_version_id,
+ DocumentationEnum.CLOWM_INFO,
+ ),
+ ]).finally(() => {
+ updateParameterPools(
+ // eslint-disable-next-line @typescript-eslint/no-non-null-assertion
+ workflowRepository.documentationFiles[props.workflow_version_id!],
+ );
+ });
+ }
+});
+</script>
+
+<template>
+ <div class="row border-bottom mb-4">
+ <h2 class="mb-2">Enhance your Workflow</h2>
+ </div>
+ <div>
+ Enhance your Workflow with CloWM:
+ <ul>
+ <li>
+ Maximize the potential of your workflow within CloWM by incorporating a
+ <code>clowm_info.json</code> file directly into your repository's root
+ directory. This simple addition empowers you to provide comprehensive
+ details about your workflow's parameters and overall structure,
+ enhancing its usability and user experience.
+ </li>
+ <li>
+ Customize Parameters: Infuse semantic meaning into various parameters,
+ enriching the understanding and functionality of your workflow.
+ </li>
+ <li>
+ Publication Linking: Seamlessly integrate a DOI link to your
+ publication, facilitating easy access to additional resources and
+ information.
+ </li>
+ <li>
+ Experience Enhanced Workflow: Elevate your workflow's presentation on
+ the CloWM platform by ensuring essential information is readily
+ available to users.
+ </li>
+ </ul>
+ </div>
+ <p>
+ Unlock the full potential of your workflow in CloWM by exploring the tabs
+ below for guidance on creating and implementing the
+ <code>clowm_info.json</code> file.
+ </p>
+ <div class="accordion mb-4" id="clowmInfoAccordion">
+ <div class="accordion-item">
+ <h2 class="accordion-header">
+ <button
+ class="accordion-button"
+ type="button"
+ data-bs-toggle="collapse"
+ data-bs-target="#clowmInfoAccordion-input"
+ aria-expanded="true"
+ aria-controls="clowmInfoAccordion-input"
+ >
+ Input Parameters
+ </button>
+ </h2>
+ <div
+ id="clowmInfoAccordion-input"
+ class="accordion-collapse collapse show"
+ data-bs-parent="#clowmInfoAccordion"
+ >
+ <div class="accordion-body">
+ <p>
+ <b>Designate Parameters as Input Files</b>: Assign semantic meaning
+ to parameters by dragging them from the left side to the right side
+ to designate them as input files.
+ </p>
+ <draggable-lists
+ :left-list="parameterPools.input"
+ :right-list="infoState.inputParameters"
+ >
+ <template #leftHeader>Workflow Parameters</template>
+ <template #rightHeader>Input Parameters</template>
+ </draggable-lists>
+ </div>
+ </div>
+ </div>
+ <div class="accordion-item">
+ <h2 class="accordion-header">
+ <button
+ class="accordion-button collapsed"
+ type="button"
+ data-bs-toggle="collapse"
+ data-bs-target="#clowmInfoAccordion-output"
+ aria-expanded="false"
+ aria-controls="clowmInfoAccordion-output"
+ >
+ Output Parameters
+ </button>
+ </h2>
+ <div
+ id="clowmInfoAccordion-output"
+ class="accordion-collapse collapse"
+ data-bs-parent="#clowmInfoAccordion"
+ >
+ <div class="accordion-body">
+ <p>
+ <b>Designate Parameters as Output</b>: Assign semantic meaning to
+ parameters by dragging them from the left side to the right side to
+ designate them as output files.
+ </p>
+ <draggable-lists
+ :left-list="parameterPools.output"
+ :right-list="infoState.outputParameters"
+ >
+ <template #leftHeader>Workflow Parameters</template>
+ <template #rightHeader>Output Parameters</template>
+ </draggable-lists>
+ </div>
+ </div>
+ </div>
+ <div class="accordion-item">
+ <h2 class="accordion-header">
+ <button
+ class="accordion-button collapsed"
+ type="button"
+ data-bs-toggle="collapse"
+ data-bs-target="#clowmInfoAccordion-resource"
+ aria-expanded="false"
+ aria-controls="clowmInfoAccordion-resource"
+ >
+ Resource Parameters
+ </button>
+ </h2>
+ <div
+ id="clowmInfoAccordion-resource"
+ class="accordion-collapse collapse"
+ data-bs-parent="#clowmInfoAccordion"
+ >
+ <div class="accordion-body">
+ <p>
+ <b>Designate Parameters as Resources</b>: Drag parameters from the
+ left side to the right side to imbue them with semantic meaning as
+ resource parameters. CloWM automatically generates a specialized
+ form input for users to configure these parameters.
+ </p>
+ <button
+ v-if="infoState.resourceParameters == undefined"
+ type="button"
+ class="btn btn-primary"
+ @click="infoState.resourceParameters = []"
+ >
+ This workflow needs resources
+ </button>
+ <draggable-lists
+ :left-list="parameterPools.resources"
+ :right-list="infoState.resourceParameters"
+ v-else
+ >
+ <template #leftHeader>Workflow Parameters</template>
+ <template #rightHeader>Resources Parameters</template>
+ </draggable-lists>
+ </div>
+ </div>
+ </div>
+ <div class="accordion-item">
+ <h2 class="accordion-header">
+ <button
+ class="accordion-button collapsed"
+ type="button"
+ data-bs-toggle="collapse"
+ data-bs-target="#clowmInfoAccordion-example"
+ aria-expanded="false"
+ aria-controls="clowmInfoAccordion-example"
+ >
+ Example Parameters
+ </button>
+ </h2>
+ <div
+ id="clowmInfoAccordion-example"
+ class="accordion-collapse collapse"
+ data-bs-parent="#clowmInfoAccordion"
+ >
+ <div class="accordion-body">
+ <p>
+ <b>Enhance Workflow Testing</b>: Incorporate example parameters
+ using publicly available test data. Easily achieve this by including
+ a sample dataset in your Git repository and linking its URL as the
+ input parameter.
+ </p>
+ <p>
+ <b>Guidance on Parameter Setting</b>: Avoid specifying parameters
+ that define output locations or resource paths, as these are heavily
+ dependent on the user or execution environment.
+ </p>
+ <div
+ class="d-flex flex-wrap overflow-y-scroll p-1 border rounded border-dashed mb-2"
+ style="max-height: 30vh"
+ >
+ <div
+ class="w-fit border px-2 rounded cursor-pointer m-1 parameter-container"
+ v-for="(param, index) in parameterPools.examples"
+ :key="param"
+ @click="addExampleParameter(param, index)"
+ >
+ {{ param }}
+ </div>
+ </div>
+ <table class="table table-bordered">
+ <thead>
+ <tr>
+ <th scope="col"><b>Parameter</b></th>
+ <th scope="col"><b>Value</b></th>
+ </tr>
+ </thead>
+ <tbody v-if="infoState.exampleParameters">
+ <tr
+ v-for="param in Object.keys(infoState.exampleParameters)"
+ :key="param"
+ >
+ <td style="width: 10%">{{ param }}</td>
+ <td class="d-flex justify-content-between align-items-center">
+ <input
+ v-if="
+ getParameterType(param) === 'number' ||
+ getParameterType(param) === 'integer'
+ "
+ type="number"
+ class="form-control form-control-sm flex-grow"
+ v-model="infoState.exampleParameters[param]"
+ :step="getParameterType(param) === 'integer' ? 1 : 0.0001"
+ :min="parameterSchema[param]['minimum']"
+ :max="parameterSchema[param]['maximum']"
+ />
+ <div
+ v-else-if="getParameterType(param) === 'boolean'"
+ class="flex-grow"
+ >
+ <div class="form-check form-check-inline">
+ <label
+ class="form-check-label"
+ :for="'trueOption' + param.replace(/\./g, '')"
+ >True</label
+ >
+ <input
+ class="form-check-input"
+ type="radio"
+ :name="'inlineRadioOptions' + param.replace(/\./g, '')"
+ :id="'trueOption' + param.replace(/\./g, '')"
+ :value="true"
+ v-model="infoState.exampleParameters[param]"
+ />
+ </div>
+ <div class="form-check form-check-inline">
+ <input
+ class="form-check-input"
+ type="radio"
+ :name="'inlineRadioOptions' + param.replace(/\./g, '')"
+ :id="'falseOption' + param.replace(/\./g, '')"
+ :value="false"
+ v-model="infoState.exampleParameters[param]"
+ />
+ <label
+ class="form-check-label"
+ :for="'falseOption' + param.replace(/\./g, '')"
+ >False</label
+ >
+ </div>
+ </div>
+ <select
+ v-else-if="parameterSchema[param]?.['enum']"
+ class="form-select form-select-sm flex-grow"
+ v-model="infoState.exampleParameters[param]"
+ >
+ <option
+ v-for="option in parameterSchema[param]?.['enum']"
+ :key="option"
+ :value="option"
+ >
+ {{ option }}
+ </option>
+ </select>
+ <input
+ v-else
+ type="text"
+ class="form-control form-control-sm flex-grow"
+ v-model="infoState.exampleParameters[param]"
+ :pattern="parameterSchema[param]?.['pattern']"
+ />
+ <button
+ type="button"
+ class="btn btn-outline-danger btn-sm ms-2"
+ @click="deleteExampleParameter(param)"
+ >
+ Remove
+ </button>
+ </td>
+ </tr>
+ </tbody>
+ </table>
+ </div>
+ </div>
+ </div>
+ <div class="accordion-item">
+ <h2 class="accordion-header">
+ <button
+ class="accordion-button collapsed"
+ type="button"
+ data-bs-toggle="collapse"
+ data-bs-target="#clowmInfoAccordion-dois"
+ aria-expanded="false"
+ aria-controls="clowmInfoAccordion-dois"
+ >
+ DOIs
+ </button>
+ </h2>
+ <div
+ id="clowmInfoAccordion-dois"
+ class="accordion-collapse collapse"
+ data-bs-parent="#clowmInfoAccordion"
+ >
+ <div class="accordion-body">
+ <p>
+ <b>Share Publications Easily</b>: Include the DOI for your
+ workflow's related publications and watch as the generated links
+ seamlessly appear on your workflow's dedicated page.
+ </p>
+ <button type="button" class="btn btn-primary" @click="addDoi">
+ Add DOI
+ </button>
+ <div v-if="infoState.dois">
+ <div
+ class="d-flex my-2"
+ v-for="(doi, index) in infoState.dois"
+ :key="index"
+ >
+ <button
+ type="button"
+ class="btn btn-outline-danger btn-sm"
+ @click="removeDoi(index)"
+ >
+ Remove
+ </button>
+ <input
+ type="text"
+ class="form-control mx-2"
+ v-model="infoState.dois[index]"
+ maxlength="48"
+ style="max-width: 400px"
+ />
+ <div class="align-self-center">
+ DOI Link:
+ <a
+ :href="'https://doi.org/' + doi"
+ target="_blank"
+ class="align-self-center"
+ >https://doi.org/{{ doi }}
+ <font-awesome-icon
+ icon="fa-solid fa-arrow-up-right-from-square"
+ class="ms-1"
+ />
+ </a>
+ </div>
+ </div>
+ </div>
+ </div>
+ </div>
+ </div>
+ </div>
+ <h5>Generated <code>clowm_info.json</code></h5>
+ <pre class="rounded w-100"><code>{{ infoState }}</code></pre>
+ <p>
+ Add this file to your Git repository, commit and push your changes and
+ register the new workflow version in CloWM
+ </p>
+ <copy-to-clipboard-icon button :text="infoStateString" />
+ <a class="btn btn-primary ms-2" :href="downloadUrl" download="clowm_info.json"
+ >Download to file
+ <font-awesome-icon icon="fa-solid fa-download" class="ms-1" />
+ </a>
+</template>
+
+<style scoped>
+.parameter-container:hover {
+ background: var(--bs-secondary-bg-subtle);
+}
+</style>
diff --git a/src/views/workflows/ListWorkflowExecutionsView.vue b/src/views/workflows/ListWorkflowExecutionsView.vue
index c3d87aa..5b96f03 100644
--- a/src/views/workflows/ListWorkflowExecutionsView.vue
+++ b/src/views/workflows/ListWorkflowExecutionsView.vue
@@ -165,7 +165,7 @@ onUnmounted(() => {
:execution-id="executionsState.executionParameters"
/>
<div
- class="row m-2 border-bottom mb-4 justify-content-between align-items-center"
+ class="row border-bottom mb-4 justify-content-between align-items-center"
>
<h2 class="mb-2 w-fit">My Workflow Executions</h2>
<div class="w-fit">
diff --git a/src/views/workflows/ListWorkflowsView.vue b/src/views/workflows/ListWorkflowsView.vue
index 56ccb5a..4c54cf1 100644
--- a/src/views/workflows/ListWorkflowsView.vue
+++ b/src/views/workflows/ListWorkflowsView.vue
@@ -51,15 +51,15 @@ function filterWorkflowWithoutVersion(workflow: WorkflowOut): boolean {
}
const processedWorkflows = computed<WorkflowOut[]>(() => {
- return [
- ...workflowRepository.workflows.filter(
- (workflow) =>
- filterWorkflowByString(workflow) &&
- filterWorkflowWithoutVersion(workflow),
- ),
- ].sort((a, b) =>
+ const temp = workflowRepository.workflows.filter(
+ (workflow) =>
+ filterWorkflowByString(workflow) &&
+ filterWorkflowWithoutVersion(workflow),
+ );
+ temp.sort((a, b) =>
filterFunctionMapping[workflowsState.sortByAttribute](a, b) ? 1 : -1,
);
+ return temp;
});
onMounted(() => {
diff --git a/src/views/workflows/MyWorkflowsView.vue b/src/views/workflows/MyWorkflowsView.vue
index 48d1c28..8b5b935 100644
--- a/src/views/workflows/MyWorkflowsView.vue
+++ b/src/views/workflows/MyWorkflowsView.vue
@@ -114,7 +114,7 @@ onMounted(() => {
modal-i-d="updateWorkflowCredentialsModal"
/>
<div
- class="row m-2 border-bottom mb-4 justify-content-between align-items-center pb-2"
+ class="row border-bottom mb-4 justify-content-between align-items-center pb-2"
>
<h2 class="w-fit">My Workflows</h2>
<button
diff --git a/src/views/workflows/ReviewWorkflowsView.vue b/src/views/workflows/ReviewWorkflowsView.vue
index 8507574..ad15851 100644
--- a/src/views/workflows/ReviewWorkflowsView.vue
+++ b/src/views/workflows/ReviewWorkflowsView.vue
@@ -63,7 +63,7 @@ onMounted(() => {
</script>
<template>
- <div class="row m-2 border-bottom mb-4">
+ <div class="row border-bottom mb-4">
<h2 class="mb-2">Workflow Reviews</h2>
</div>
<div v-if="workflowsState.loading" class="text-center mt-5">
diff --git a/src/views/workflows/StartWorkflowView.vue b/src/views/workflows/StartWorkflowView.vue
index df2f89e..e6fde26 100644
--- a/src/views/workflows/StartWorkflowView.vue
+++ b/src/views/workflows/StartWorkflowView.vue
@@ -8,7 +8,10 @@ import { Toast } from "bootstrap";
import { useWorkflowExecutionStore } from "@/stores/workflowExecutions";
import BootstrapToast from "@/components/BootstrapToast.vue";
import { useWorkflowStore } from "@/stores/workflows";
-import type { WorkflowParameters } from "@/types/WorkflowParameters";
+import type {
+ WorkflowMetaParameters,
+ WorkflowParameters,
+} from "@/types/WorkflowParameters";
const executionRepository = useWorkflowExecutionStore();
const workflowRepository = useWorkflowStore();
@@ -69,10 +72,7 @@ function downloadParameterSchema() {
function startWorkflow(
parameters: WorkflowParameters,
- notes?: string,
- logs_s3_path?: string,
- debug_s3_path?: string,
- provenance_s3_path?: string,
+ metaParameters: WorkflowMetaParameters,
) {
if (props.versionId) {
versionState.workflowExecutionError = undefined;
@@ -81,12 +81,10 @@ function startWorkflow(
.startExecution({
workflow_version_id: props.versionId,
parameters: parameters,
- notes: notes,
- logs_s3_path: logs_s3_path?.length ?? 0 > 0 ? logs_s3_path : undefined,
- debug_s3_path:
- debug_s3_path?.length ?? 0 > 0 ? debug_s3_path : undefined,
- provenance_s3_path:
- provenance_s3_path?.length ?? 0 > 0 ? provenance_s3_path : undefined,
+ notes: metaParameters.notes,
+ logs_s3_path: metaParameters.logs_s3_path,
+ debug_s3_path: metaParameters.debug_s3_path,
+ provenance_s3_path: metaParameters.provenance_s3_path,
mode_id: props.workflowModeId,
})
.then(() => {
--
GitLab