Commit 806cd490 authored by Tizian Schulz's avatar Tizian Schulz
Browse files

Added Biopython as dependency for comparison workflow

parent 7295d0c3
......@@ -25,10 +25,13 @@ PLAST builds a **compacted, colored de Bruijn graph** from given input genomes u
Parameter estimations for alignment statistics can be done using a workflow that
requires a running version of
[snakemake](https://snakemake.readthedocs.io/en/stable/) and the additional
packages [matplotlib](https://matplotlib.org) and
[snakemake](https://snakemake.readthedocs.io/en/stable/) and the Python
packages [matplotlib](https://matplotlib.org) and
[scipy](https://www.scipy.org).
A provided tool comparison workflow additionally requires the package
[Biopython](https://biopython.org) to be installed on your system.
[^1]: Currently, we are experiencing problems with newer versions of Bifrost
(starting from commit d238263a99f0dd2d590e11b558ed8ae771177a75) on some
operating systems. We are working on a solution for this issue.
......
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