diff --git a/mu_map/data/datasets.py b/mu_map/data/datasets.py index 752ac6a9c6d82f5cf6a0390325b490e00ccd9b9a..64fd191d1421b303ea451d2bba85ebbb97e9b466 100644 --- a/mu_map/data/datasets.py +++ b/mu_map/data/datasets.py @@ -6,6 +6,7 @@ import pydicom import numpy as np from torch.utils.data import Dataset +from mu_map.data.prepare import headers from mu_map.data.remove_bed import DEFAULT_BED_CONTOURS_FILENAME, load_contours from mu_map.data.review_mu_map import discard_slices @@ -69,8 +70,8 @@ class MuMapDataset(Dataset): def __getitem__(self, index: int): row = self.table.iloc[index] - recon_file = os.path.join(self.dir_images, row["file_recon_no_ac"]) - mu_map_file = os.path.join(self.dir_images, row["file_mu_map"]) + recon_file = os.path.join(self.dir_images, row[header.file_recon_nac_nsc]) + mu_map_file = os.path.join(self.dir_images, row[headers.file_mu_map]) recon = pydicom.dcmread(recon_file).pixel_array mu_map = pydicom.dcmread(mu_map_file).pixel_array