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{"nbformat":4,"nbformat_minor":0,"metadata":{"colab":{"name":"Python_course_2021_exercises_F.ipynb","provenance":[],"collapsed_sections":[],"authorship_tag":"ABX9TyMrKbpipzB2ofTkmux8rheE"},"kernelspec":{"name":"python3","display_name":"Python 3"}},"cells":[{"cell_type":"markdown","metadata":{"id":"C6hjQZrrO1lx"},"source":["# Python course 2021 - Exercises F"]},{"cell_type":"markdown","metadata":{"id":"RoMsf4tCO3CA"},"source":["## Part1 - DNA, RNA and peptide sequences"]},{"cell_type":"markdown","metadata":{"id":"3_wMYLkSPBrx"},"source":["\r\n","\r\n","---\r\n","1.1) Write a function to get the reverse complement (upper case letters) of a DNA sequence given in upper case letters!\r\n"]},{"cell_type":"code","metadata":{"id":"Uq70MpOBPMpe"},"source":[""],"execution_count":null,"outputs":[]},{"cell_type":"markdown","metadata":{"id":"trElcFlcPMzg"},"source":["\r\n","\r\n","---\r\n","1.2) Write a function to convert a DNA sequence into a RNA sequence!\r\n"]},{"cell_type":"code","metadata":{"id":"ahMEGCWTPUAY"},"source":[""],"execution_count":null,"outputs":[]},{"cell_type":"markdown","metadata":{"id":"EOMgpzlnPUJ6"},"source":["\r\n","\r\n","---\r\n","1.3) Write a function to translate a DNA sequence into amino acids (first frame only)!\r\n","* Tip: [wiki - codon tables](https://en.wikipedia.org/wiki/DNA_and_RNA_codon_tables)\r\n"]},{"cell_type":"code","metadata":{"id":"aFVhE4KEPrM4"},"source":[""],"execution_count":null,"outputs":[]},{"cell_type":"markdown","metadata":{"id":"3-KHtLeePsQ4"},"source":["\r\n","\r\n","---\r\n","1.4) Write a function to translate DNA sequences in all 6 frames into peptide sequences! The longest peptide sequence per DNA sequence should be returned!\r\n"]},{"cell_type":"code","metadata":{"id":"s50AlgALP8I3","executionInfo":{"status":"ok","timestamp":1610969544596,"user_tz":-60,"elapsed":1163,"user":{"displayName":"Katharina Sielemann","photoUrl":"","userId":"00960067943696917992"}}},"source":[""],"execution_count":4,"outputs":[]}]}