Compare revisions

Bianca Laker · Bianca Laker · Bianca Laker · Bianca Laker · Bianca Laker · Bianca Laker
--- a/2024_course_slides_set1.pdf
+++ b/2024_course_slides_set1.pdf
--- a/2024_course_slides_set2.1_functions.pdf
+++ b/2024_course_slides_set2.1_functions.pdf
--- a/2024_course_slides_set2.2_control_structures.pdf
+++ b/2024_course_slides_set2.2_control_structures.pdf
--- a/2024_course_slides_set3_loops.pdf
+++ b/2024_course_slides_set3_loops.pdf
--- a/2024_course_slides_set4_range_enumerate.pdf
+++ b/2024_course_slides_set4_range_enumerate.pdf
--- a/2024_course_slides_set5_file_handling.pdf
+++ b/2024_course_slides_set5_file_handling.pdf
--- a/2024_course_slides_set5_file_handling2_writing.pdf
+++ b/2024_course_slides_set5_file_handling2_writing.pdf
--- a/2024_course_slides_set6_white_space_and_others.pdf
+++ b/2024_course_slides_set6_white_space_and_others.pdf
--- a/2024_course_slides_set7_modules_and_regex.pdf
+++ b/2024_course_slides_set7_modules_and_regex.pdf
--- a/2024_course_slides_set8_DNA_RNA.pdf
+++ b/2024_course_slides_set8_DNA_RNA.pdf
--- a/2024_course_slides_set9_applied_python_matplot.pdf
+++ b/2024_course_slides_set9_applied_python_matplot.pdf
--- a/Exercises/.gitkeep
+++ b/Exercises/.gitkeep
--- a/Exercises/Python_course_2021_exercises_A.ipynb
+++ b/Exercises/Python_course_2021_exercises_A.ipynb
--- a/Excercises/Python_course_exercises_B_enumerate_part3.ipynb
+++ b/Excercises/Python_course_exercises_B_enumerate_part3.ipynb
--- a/Excercises/Python_course_exercises_B_loops_part2.ipynb
+++ b/Excercises/Python_course_exercises_B_loops_part2.ipynb
--- a/Excercises/Python_course_exercises_B_part1.ipynb
+++ b/Excercises/Python_course_exercises_B_part1.ipynb
--- a/Excercises/Python_course_exercises_C.ipynb
+++ b/Excercises/Python_course_exercises_C.ipynb
--- a/Excercises/Python_course_exercises_D_part1.ipynb
+++ b/Excercises/Python_course_exercises_D_part1.ipynb
--- a/Excercises/Python_course_exercises_D_part2.ipynb
+++ b/Excercises/Python_course_exercises_D_part2.ipynb
+%% Cell type:markdown id: tags:
+
+## Part2 - characters
+
+%% Cell type:markdown id: tags:
+
+
+
+---
+2.1) Read the file AtCol0_Exons.fasta and write the following:
+*   Only Arabidopsis Gene Identifier (e.g. AT1G01010)
+*   Gene Identifier, exon name, exon length (tab-delimited)
+
+
+
+%% Cell type:code id: tags:
+
+``` 
+```
+%% Cell type:markdown id: tags:
+
+## Part2 - characters
+
+%% Cell type:markdown id: tags:
+
+
+
+---
+2.1) Read the file AtCol0_Exons.fasta and write the following:
+*   Only Arabidopsis Gene Identifier (e.g. AT1G01010)
+*   Gene Identifier, exon name, exon length (tab-delimited)
+
+
+
+%% Cell type:code id: tags:
+
+``` 
+```
--- a/Excercises/Python_course_exercises_E.ipynb
+++ b/Excercises/Python_course_exercises_E.ipynb
+%% Cell type:markdown id: tags:
+
+# Python course 2021 - Exercises E
+
+%% Cell type:markdown id: tags:
+
+## Part1 - modules
+
+%% Cell type:markdown id: tags:
+
+
+
+---
+1.1) Write all AGIs of AtCol0_exons.fasta into a new file!
+
+%% Cell type:code id: tags:
+
+``` 
+
+```
+
+%% Cell type:markdown id: tags:
+
+
+
+---
+1.2) Some IDs occur multiple times. Add a filter step to reduce the results to unique IDs!
+
+%% Cell type:code id: tags:
+
+``` 
+
+```
+
+%% Cell type:markdown id: tags:
+
+
+
+---
+1.3) Calculate the frequency of each AGI and construct a histogram (matplotlib)!
+```
+plt.hist(<list_of_values>)    #tip
+```
+
+
+
+%% Cell type:code id: tags:
+
+``` 
+
+```
+%% Cell type:markdown id: tags:
+
+# Python course 2021 - Exercises E
+
+%% Cell type:markdown id: tags:
+
+## Part1 - modules
+
+%% Cell type:markdown id: tags:
+
+
+
+---
+1.1) Write all AGIs of AtCol0_exons.fasta into a new file!
+
+%% Cell type:code id: tags:
+
+``` 
+
+```
+
+%% Cell type:markdown id: tags:
+
+
+
+---
+1.2) Some IDs occur multiple times. Add a filter step to reduce the results to unique IDs!
+
+%% Cell type:code id: tags:
+
+``` 
+
+```
+
+%% Cell type:markdown id: tags:
+
+
+
+---
+1.3) Calculate the frequency of each AGI and construct a histogram (matplotlib)!
+```
+plt.hist(<list_of_values>)    #tip
+```
+
+
+
+%% Cell type:code id: tags:
+
+``` 
+
+```
No results found