Commits · 9800f0b3f30b172fc8287dbf88fa6fb92dbf4e90 · Tamino Huxohl / mu-map · GitLab

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Dec 07, 2022
- Merge branch 'main' of https://gitlab.ub.uni-bielefeld.de/thuxohl/mu-map · 9800f0b3
  Tamino Huxohl authored 2 years ago
  
  9800f0b3
- introduce custom dicom filetype and make scaling of images optional · 8e4437bb
  Tamino Huxohl authored 2 years ago
  
  8e4437bb
- Merge branch 'main' of https://gitlab.ub.uni-bielefeld.de/thuxohl/mu-map · a39d7b07
  Tamino Huxohl authored 2 years ago
  
  a39d7b07
- remove tomolab reconstruction · 7966db83
  Tamino Huxohl authored 2 years ago
  
  7966db83
- dicom util uses reandom instead of time for id creation · 9d8618e2
  Tamino Huxohl authored 2 years ago
  
  9d8618e2
Nov 23, 2022
- fix filename storing in prepare_polar_maps · c2d5166e
  Tamino Huxohl authored 2 years ago
  
  c2d5166e
- add script to extract perfusion values from polar maps · 24983eb3
  Tamino Huxohl authored 2 years ago
  
  24983eb3
- Merge branch 'main' of https://gitlab.ub.uni-bielefeld.de/thuxohl/mu-map · 404b8d0f
  Tamino Huxohl authored 2 years ago
  
  404b8d0f
- add script to extract polar maps from dicom images · 4e72bfee
  Tamino Huxohl authored 2 years ago
  
  4e72bfee
Nov 18, 2022
- rename recon module to osem and add postfilter support · 00c4956e
  Tamino Huxohl authored 2 years ago
  
  00c4956e
- add module for filter applied to the reconstruction · 8fb2b79b
  Tamino Huxohl authored 2 years ago
  
  8fb2b79b
- add keys class to interfile module · 5517a6e4
  Tamino Huxohl authored 2 years ago
  
  5517a6e4
- invert mu_map and add filtering to recon script · 2e3436b7
  Tamino Huxohl authored 2 years ago
  
  2e3436b7
- add global variable for dicom file extension · 1cd6a5a2
  Tamino Huxohl authored 2 years ago
  
  1cd6a5a2
- correctly pass args in recon script · e0eafaf3
  Tamino Huxohl authored 2 years ago
  
  e0eafaf3
- refactor __init__ of file package · df4cde3d
  Tamino Huxohl authored 2 years ago
  
  df4cde3d
Nov 17, 2022
- add script for reconstruction · e167679d
  Tamino Huxohl authored 2 years ago
  
  e167679d
- update projection script (header and util function usage) · c5cb4ed3
  Tamino Huxohl authored 2 years ago
  
  c5cb4ed3
- implement utility to load either dicom or interfile to interfile · 62f59e49
  Tamino Huxohl authored 2 years ago
  
  62f59e49
- update header template for interfile recon · 5f6917dd
  Tamino Huxohl authored 2 years ago
  
  5f6917dd
- update projection script to allow projections without writing a file · adc8795f
  Tamino Huxohl authored 2 years ago
  
  adc8795f
- add a few directories to gitignore · d66b5b05
  Tamino Huxohl authored 2 years ago
  
  d66b5b05
- enhance interfile utils · b79279b1
  Tamino Huxohl authored 2 years ago
  
  b79279b1
- rename inter2dicom conversion script · 777a9e16
  Tamino Huxohl authored 2 years ago
  
  777a9e16
- rename conversion script and add capability to convert without writing file · 10ce0544
  Tamino Huxohl authored 2 years ago
  
  10ce0544
- formatting of dicom utils · a4d9eb1c
  Tamino Huxohl authored 2 years ago
  
  a4d9eb1c
- lib/install.sh script determines global dependencies based on ubuntu lts version · 6d791d81
  Tamino Huxohl authored 2 years ago
  
  6d791d81
- start refactoring project module · 0684543a
  Tamino Huxohl authored 2 years ago
  
  0684543a
- write comment in uninstall_stir script correctly · 434d1b0b
  Tamino Huxohl authored 2 years ago
  
  434d1b0b
- add uility script to uninstall STIR · bcdec527
  Tamino Huxohl authored 2 years ago
  
  bcdec527
- build STIR into a different directory and add it to the gitignore · ab8c85ff
  Tamino Huxohl authored 2 years ago
  
  ab8c85ff
- enable OPENMP and disable MPI in libs/install.sh for STIR · ccc33275
  Tamino Huxohl authored 2 years ago
  
  ccc33275
- libs install script installs STIR into the virtual env instead of globally · 4d221f80
  Tamino Huxohl authored 2 years ago
  
  4d221f80
Nov 16, 2022
- Merge branch 'main' of https://gitlab.ub.uni-bielefeld.de/thuxohl/mu-map · 19df3e60
  Tamino Huxohl authored 2 years ago
  
  19df3e60
- update dicom/interfile utils · 418d9d89
  Tamino Huxohl authored 2 years ago
  
  418d9d89
- add script to visualize 3d volumes as a slice video · 6e26c0ca
  Tamino Huxohl authored 2 years ago
  
  6e26c0ca
- include parallelproj and STIR as submoduels · 9f8292b5
  Tamino Huxohl authored 2 years ago
  
  9f8292b5
Nov 10, 2022
- add script to project an interfile reconstruction · b62a6936
  Tamino Huxohl authored 2 years ago
  
  b62a6936
- add utilities for interfile and dicom handling · 3b541025
  Tamino Huxohl authored 2 years ago
  
  3b541025
- add install script for STIR and parallelproj as external libraries · 8038987a
  Tamino Huxohl authored 2 years ago
  
  8038987a