Commits · a39d7b0749173f86b3bd3037c528f43bfa10800c · Tamino Huxohl / mu-map · GitLab

Snippets Groups Projects

Nov 23, 2022
- fix filename storing in prepare_polar_maps · c2d5166e
  Tamino Huxohl authored 2 years ago
  
  c2d5166e
- add script to extract perfusion values from polar maps · 24983eb3
  Tamino Huxohl authored 2 years ago
  
  24983eb3
- add script to extract polar maps from dicom images · 4e72bfee
  Tamino Huxohl authored 2 years ago
  
  4e72bfee
Oct 20, 2022
- add functions to remove/add bed to remove_bed module · 52d01622
  Tamino Huxohl authored 2 years ago
  
  52d01622
- add function to remove bed · 61535248
  Tamino Huxohl authored 2 years ago
  
  61535248
- update remove bed script · ee8b2a6e
  Tamino Huxohl authored 2 years ago
  
  ee8b2a6e
Oct 17, 2022
- enhancements to bed removal script · c6ae15cb
  Tamino Huxohl authored 2 years ago
  
  c6ae15cb
- adapt review_mu_map to refactoring · 6102c7e5
  Tamino Huxohl authored 2 years ago
  
  6102c7e5
- formatting · d716673d
  Tamino Huxohl authored 2 years ago
  
  d716673d
Oct 14, 2022
- revice prepare script for a better mapping from projections to reconstructions and mu maps · ec3495df
  Tamino Huxohl authored 2 years ago
  
  ec3495df
Sep 27, 2022
- splits are now parsed as dicts · 6442ed68
  Tamino Huxohl authored 2 years ago
  
  6442ed68
- restructuring to separate data processing from torch dataset implementations · 2ae5e9e3
  Tamino Huxohl authored 2 years ago
  
  2ae5e9e3
Sep 26, 2022
- add mock dataset for testing purposes · 5ad12c55
  Tamino Huxohl authored 2 years ago
  
  5ad12c55
- update patch dataset to mu map dataset changes · cd45562c
  Tamino Huxohl authored 2 years ago
  
  cd45562c
- mu map dataset now return torch tensors with channel dimension · d31cbb27
  Tamino Huxohl authored 2 years ago
  
  d31cbb27
Sep 02, 2022
- fix patch dataset · eeafcf78
  Tamino Huxohl authored 2 years ago
  
  eeafcf78
- add option to save images to MuMapDataset main method · 75b69fca
  Tamino Huxohl authored 2 years ago
  
  75b69fca
- first implementation of the patch dataset · 646f5d3d
  Tamino Huxohl authored 2 years ago
  
  646f5d3d
Sep 01, 2022
- introduce new mu map dataset consisting of patches · 568fb6be
  Tamino Huxohl authored 2 years ago
  
  568fb6be
- fix imports in mu map dataset · eed88628
  Tamino Huxohl authored 2 years ago
  
  eed88628
- fix image pre-loading in dataset · 81a9f9e3
  Tamino Huxohl authored 2 years ago
  
  81a9f9e3
- implement image pre-loading in dataset · 81dde9cf
  Tamino Huxohl authored 2 years ago
  
  81dde9cf
- remove unused vairables · 736863f7
  Tamino Huxohl authored 2 years ago
  
  736863f7
- add a script to create dataset split based on patient ids and provide utility... · 44ac5903
  Tamino Huxohl authored 2 years ago
  
  add a script to create dataset split based on patient ids and provide utility function to load a split
  44ac5903
- fix mu map dataset and add options for display · d80575c9
  Tamino Huxohl authored 2 years ago
  
  d80575c9
- fix remove bed contours script · aa3f3119
  Tamino Huxohl authored 2 years ago
  
  aa3f3119
- add state print to review mu map · 37d8e021
  Tamino Huxohl authored 2 years ago
  
  37d8e021
- fix mu map dataset to new header · 68c37f62
  Tamino Huxohl authored 2 years ago
  
  68c37f62
- update review_mu_map script · 8a9d722e
  Tamino Huxohl authored 2 years ago
  
  8a9d722e
- update prepare script to deal with new strcuture (scatter corrections and attenuation corrections) · ae7a78ba
  Tamino Huxohl authored 2 years ago
  
  ae7a78ba
Aug 31, 2022
- update visualization of mu map dataset · ac333689
  Tamino Huxohl authored 2 years ago
  
  ac333689
Aug 30, 2022
- restruture so that discard slices is again in review_mu_map module · d3b2b7c8
  Tamino Huxohl authored 2 years ago
  
  d3b2b7c8
- integrate bed removal into dataset · be6ba62b
  Tamino Huxohl authored 2 years ago
  
  be6ba62b
- add script that allows to remove the bed from attenuation maps · 5035a290
  Tamino Huxohl authored 2 years ago
  
  5035a290
Aug 29, 2022
- include slice removal from mu_map in the dataset · 27c9e209
  Tamino Huxohl authored 2 years ago
  
  27c9e209
- add a script to review if slices should be excluded from the mu_map · 3178da67
  Tamino Huxohl authored 2 years ago
  
  3178da67
- prepare script selects shape with fewest slices for meta.csv · 0869a2fa
  Tamino Huxohl authored 2 years ago
  
  0869a2fa
- start implementing mu map dataset · d6081a86
  Tamino Huxohl authored 2 years ago
  
  d6081a86
- remove import fram data __init__ · 4b18f5d0
  Tamino Huxohl authored 2 years ago
  
  4b18f5d0
Aug 25, 2022
- adapt preparse script to new study descriptions · 7e9d42da
  Tamino Huxohl authored 2 years ago
  
  7e9d42da