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Tamino Huxohl
mu-map
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c4ac5562975260a424dbc5e47ec18f5e828a2ed2
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feature/hydra_config
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formatting and change util script to be able to load directories as symlinks
eval.random_search.outlier allows to set the random search dir and is robust to unavailable parameter values
update label_outliers script to print the average NMAE
add sbatch files used for slurm to gitignore
update gitignore
fix usage of custom random search dir in oulier labeling
merge (gitignore)
fix that random_search can user other datasets
try introducing dataset dir to cgan random search
update gitignore
add scatter correction as a random search param to be evaluate
Merge branch 'main' of https://gitlab.ub.uni-bielefeld.de/thuxohl/mu-map
mu_map/random_search/eval/params.py allows the evaluation of multiple params with the same call
add all cgan_random_search dirs to gitignore
change create_gif.py behaviour to not loop per default
cgan random search now includes scatter correction as a parameter
Merge branch 'main' into feature/hydra_config
add roi command to create_gif
add script to create a gif from 3d images
add script to compute a single mu map
update osem reconstruction
conversion to dicom changes UID
update vis.slices with image config params
implement conversion func from interfile to dicom
remove debug print statements from file util
update file utils
renameing and change_size accepts negative target sizes
add module with global image config
rename load to load_any in file.convert
update gitignore to ignore build files
rename load_img to load_any in file.convert
implement get_format method in file.convert
use new types in file.nrrd and implement cropping and padding
add module for typing
update pyproject.toml
adapt other depending code
load nrrd files and update conversion - file handling in general
update dicom implementation with a dataclass wrapping header and image as well additional functionality
implement automatic patient bed detection
update label of loss type plot in random_search.eval.params
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